RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 CLDN9O95484 217 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 VNN2O95498 520 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 CHRM5P08912 532 aaPredicted RBP10.9□□□□□ -0.66
SCLT1-201ENST00000281142 CD9P21926 228 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 OR1D2P34982 312 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 MAPKAPK2P49137 400 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 CDH12P55289 794 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 MXD1Q05195 221 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 GPM6BQ13491 265 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 KRR1Q13601 381 aaKnown RBP10.9□□□□□ -0.66
SCLT1-201ENST00000281142 ATXN7L2Q5T6C5 722 aaPredicted RBP10.9□□□□□ -0.66
SCLT1-201ENST00000281142 SLC8B1Q6J4K2 584 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 PAMR1Q6UXH9 720 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 VN1R5Q7Z5H4 357 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 ABI3BPQ7Z7G0 1075 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 GLCCI1Q86VQ1 547 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCLT1-201ENST00000281142 GTPBP3Q969Y2 492 aaKnown RBP10.9□□□□□ -0.66
SCLT1-201ENST00000281142 SAMD11Q96NU1 681 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 SLC7A5P2Q9GIP4 190 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 CRISPLD1Q9H336 500 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 ATP13A2Q9NQ11 1180 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 TLR8Q9NR97 1041 aaKnown RBP10.9□□□□□ -0.66
SCLT1-201ENST00000281142 SNTG1Q9NSN8 517 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 IL17CQ9P0M4 197 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 DUSP12Q9UNI6 340 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 BACE2Q9Y5Z0 518 aa10.9□□□□□ -0.66
SCLT1-201ENST00000281142 OR6C75A6NL08 312 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 MAGEB17A8MXT2 336 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 FAM227AF5H4B4 570 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 F5H5T6 163 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 RFXAPO00287 272 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 SCN2BO60939 215 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 CPNE3O75131 537 aaKnown RBP10.9□□□□□ -0.67
SCLT1-201ENST00000281142 STK16O75716 305 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 EPN2O95208 641 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 PRAMEF1O95521 474 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 IL7P13232 177 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 SSTR4P31391 388 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 DUOXA1Q1HG43 343 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 EXOC3L2Q2M3D2 409 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 PLPP4Q5VZY2 271 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 GET4Q7L5D6 327 aaPredicted RBP10.9□□□□□ -0.67
SCLT1-201ENST00000281142 SLC44A2Q8IWA5 706 aaPredicted RBP10.9□□□□□ -0.67
SCLT1-201ENST00000281142 CARNMT1Q8N4J0 409 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 WDR36Q8NI36 951 aaKnown RBP10.9□□□□□ -0.67
SCLT1-201ENST00000281142 SH3KBP1Q96B97 665 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 ASPNQ9BXN1 380 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 GPR63Q9BZJ6 419 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 ELOVL6Q9H5J4 265 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 C12orf10Q9HB07 376 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 NDUFAF4Q9P032 175 aa10.9□□□□□ -0.67
SCLT1-201ENST00000281142 WDR47O94967 919 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 CXCL14O95715 111 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 LAMP1P11279 417 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 GPX2P18283 190 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 PSMA3P25788 255 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 HNF4AP41235 474 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 CACNG1Q06432 222 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 PRR23CQ6ZRP0 262 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 NOXA1Q86UR1 476 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 UBASH3BQ8TF42 649 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 SLC7A6Q92536 515 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 RERGLQ9H628 205 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 ACOXLQ9NUZ1 547 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 TOR4AQ9NXH8 423 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 CLEC2DQ9UHP7 191 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 TRIOBPQ9H2D6 2365 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 A0A1W2PQ72 361 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 FAM25AB3EWG3 89 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 FAM25CB3EWG5 89 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 FAM25GB3EWG6 89 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 IGLV3-27P01718 113 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 HLA-EP13747 358 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 POLR2CP19387 275 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-201ENST00000281142 UBE3AQ05086 875 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 FCHO2Q0JRZ9 810 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 HYAL2Q12891 473 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 GPR17Q13304 367 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 LGI4Q8N135 537 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 TTC9Q92623 222 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 COPS8Q99627 209 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 EPYCQ99645 322 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 CCDC32Q9BV29 185 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 ASB8Q9H765 288 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 TPT1P8Q9HAU6 139 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 FZD4Q9ULV1 537 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 CFL2Q9Y281 166 aa10.89□□□□□ -0.67
SCLT1-201ENST00000281142 MYO7AQ13402 2215 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 HMX3A6NHT5 357 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 SUV39H1O43463 412 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 PCDH7O60245 1069 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 CD160O95971 181 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 GKP32189 559 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 RGS4P49798 205 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 SNRPD2P62316 118 aaKnown RBP10.88□□□□□ -0.67
SCLT1-201ENST00000281142 SPIBQ01892 262 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 GAB1Q13480 694 aa10.88□□□□□ -0.67
SCLT1-201ENST00000281142 DDX39BQ13838 428 aaKnown RBP10.88□□□□□ -0.67
SCLT1-201ENST00000281142 NOXRED1Q6NXP6 359 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms