RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 NR4A1P22736 598 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 XPAP23025 273 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 AK4P27144 223 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 HTR1BP28222 390 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ELK4P28324 431 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ALDH4A1P30038 563 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 MMP12P39900 470 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 YAP1P46937 504 aaKnown RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 ARCN1P48444 511 aaKnown RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 NPY2RP49146 381 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ST13P50502 369 aaKnown RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 IFITM2Q01629 132 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 NRG1Q02297 640 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 ZNF45Q02386 682 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ELP6Q0PNE2 266 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 GALNT1Q10472 559 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 SERINC3Q13530 473 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ARHGEF7Q14155 803 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 CDK10Q15131 360 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 PTPRRQ15256 657 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 RPS6KA2Q15349 733 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 DPYSL2Q16555 572 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 RFX4Q33E94 735 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 C14orf28Q4W4Y0 310 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 FAM98BQ52LJ0 330 aaKnown RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 USP43Q70EL4 1123 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 BPHLQ86WA6 291 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 CCDC28AQ8IWP9 274 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 SVOPLQ8N434 492 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 MFSD4AQ8N468 514 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ZSCAN1Q8NBB4 408 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 OR56A4Q8NGH8 313 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 MCFD2Q8NI22 146 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 TSPEARQ8WU66 669 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 CENPIQ92674 756 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 CMKLR1Q99788 373 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 APOL4Q9BPW4 351 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 CCDC90BQ9GZT6 254 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 MMP27Q9H306 513 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 DSN1Q9H410 356 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ALG2Q9H553 416 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 SUV39H2Q9H5I1 410 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 CCNB1IP1Q9NPC3 277 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 ZNF71Q9NQZ8 489 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 ABCB10Q9NRK6 738 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 GIMAP4Q9NUV9 329 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 SCN3BQ9NY72 215 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.34□□□□□ -1.39
CD53-201ENST00000271324 XPR1Q9UBH6 696 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 MAGEL2Q9UJ55 1249 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 MOSPD1Q9UJG1 213 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 TPRKBQ9Y3C4 175 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 GRIP1Q9Y3R0 1128 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 MFHAS1Q9Y4C4 1052 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 PLEKHM1Q9Y4G2 1056 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 PCDHB11Q9Y5F2 797 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 B3GALT1Q9Y5Z6 326 aa6.34□□□□□ -1.39
CD53-201ENST00000271324 SPTBN1Q01082 2364 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 CACNA1DQ01668 2161 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 UNC79Q9P2D8 2635 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 A0A0J9YYE9 177 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 A0A0U1RQS6 177 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CXorf51AA0A1B0GTR3 108 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 TSPAN11A1L157 253 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 FADS2P1A8MWK0 482 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 NME4O00746 187 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 NKX2-8O15522 239 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 ARHGEF9O43307 516 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 DUX1O43812 170 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 RECQL5O94762 991 aaPredicted RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 MFN2O95140 757 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 FKBP9O95302 570 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CLIC3O95833 236 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 FGF1P05230 155 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CCDC159P0C7I6 412 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 TRAPPC2P0DI81 140 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 TRAPPC2BP0DI82 140 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 PNLIPP16233 465 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 PAMP19021 973 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CXCR2P25025 360 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CD1CP29017 333 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 PKLRP30613 574 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 RRM2P31350 389 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 NR4A2P43354 598 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 ARSFP54793 590 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 EEFSECP57772 596 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 KCNK10P57789 538 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 RAB10P61026 200 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CRADDP78560 199 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 RAD51Q06609 339 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 TRAF3Q13114 568 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 KCNAB2Q13303 367 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 AQP6Q13520 282 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 AGERQ15109 404 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 INO80DQ53TQ3 878 aaPredicted RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 C6orf141Q5SZD1 244 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.33□□□□□ -1.4
CD53-201ENST00000271324 ATP1A1-AS1Q5TC04 95 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 AGAP9Q5VTM2 703 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 AGAP6Q5VW22 663 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms