RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 MLIPQ5VWP3 458 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 NXPE4Q6UWF7 544 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 BMP8AQ7Z5Y6 402 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 PIANPQ8IYJ0 282 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 ZSWIM3Q96MP5 696 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 TSSK6Q9BXA6 273 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 MS4A12Q9NXJ0 267 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
CDH3-201ENST00000264012 KLHL33A6NCF5 533 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 AKAP8O43823 692 aaKnown RBP13.46□□□□□ -0.25
CDH3-201ENST00000264012 CA3P07451 260 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 OR4D2P58180 307 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 ABATP80404 500 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 CARTPTQ16568 116 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 CYP27C1Q4G0S4 372 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 PHF19Q5T6S3 580 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 ASPGQ86U10 573 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 PLA2G15Q8NCC3 412 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 CHST4Q8NCG5 386 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 CD180Q99467 661 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 SLC12A9Q9BXP2 914 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 ABI3Q9P2A4 366 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 MID1O15344 667 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 TBX1O43435 398 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 FUT4P22083 530 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 RPS3P23396 243 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDH3-201ENST00000264012 NTSR1P30989 418 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 KCNC1P48547 511 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 GBX2P52951 348 aaPredicted RBP13.46□□□□□ -0.25
CDH3-201ENST00000264012 TUBA4AP68366 448 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 RBBP4Q09028 425 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 FBXO43Q4G163 708 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 IDNKQ5T6J7 187 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 HSDL2Q6YN16 418 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 CBARPQ8N350 705 aaPredicted RBP13.46□□□□□ -0.25
CDH3-201ENST00000264012 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDH3-201ENST00000264012 JPH3Q8WXH2 748 aaPredicted RBP13.46□□□□□ -0.25
CDH3-201ENST00000264012 ITPAQ9BY32 194 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 DCSTAMPQ9H295 470 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 ADAMTS6Q9UKP5 1117 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 DDX60Q8IY21 1712 aaKnown RBP13.46□□□□□ -0.25
CDH3-201ENST00000264012 ATP6V1G1O75348 118 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 LINGO3P0C6S8 592 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 KCNAB2Q13303 367 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 NFE2L1Q14494 772 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 TRIM73Q86UV7 250 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 RASGRP3Q8IV61 690 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 PIGKQ92643 395 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 TMEM203Q969S6 136 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 RDH12Q96NR8 316 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
CDH3-201ENST00000264012 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
CDH3-201ENST00000264012 ACOX3O15254 700 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 C5AR1P21730 350 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 VSX2P58304 361 aaPredicted RBP13.46□□□□□ -0.26
CDH3-201ENST00000264012 GSTM4Q03013 218 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 ZNF267Q14586 743 aaPredicted RBP13.46□□□□□ -0.26
CDH3-201ENST00000264012 DEFB134Q4QY38 66 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 SLC22A15Q8IZD6 547 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 Q8N9G6 341 aaPredicted RBP13.46□□□□□ -0.26
CDH3-201ENST00000264012 MDGA1Q8NFP4 955 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 MOAP1Q96BY2 351 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 KCTD7Q96MP8 289 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 ACTL8Q9H568 366 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 MALT1Q9UDY8 824 aa13.46□□□□□ -0.26
CDH3-201ENST00000264012 ADAM12O43184 909 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 SNAP29O95721 258 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 SLC16A8O95907 504 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 BNIP3Q12983 259 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 ELOCQ15369 112 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 TLR1Q15399 786 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 WDR45BQ5MNZ6 344 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 PHOSPHO1Q8TCT1 267 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 MCHR1Q99705 422 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 TREX1Q9NSU2 369 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 SERTAD3Q9UJW9 196 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 MGAT4BQ9UQ53 548 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 OR6C74A6NCV1 312 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 FAM25EA8MYX2 175 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 RTCAO00442 366 aaKnown RBP13.45□□□□□ -0.26
CDH3-201ENST00000264012 INMTO95050 263 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 SERPINA3P01011 423 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 OR12D1P0DN82 309 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 CDH11P55287 796 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 TRAM2Q15035 370 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 COQ5Q5HYK3 327 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 ZNF773Q6PK81 442 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 MINDY2Q8NBR6 621 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 MUS81Q96NY9 551 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 OR8D2Q9GZM6 311 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 PCDHGB1Q9Y5G3 927 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 SLAMF1Q13291 335 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 C1orf61Q13536 156 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 PROKR2Q8NFJ6 384 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 NR4A3Q92570 626 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 CNDP2Q96KP4 475 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms