RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 HLA-EP13747 358 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 CSTF2P33240 577 aaKnown RBP eCLIP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 MAPK12P53778 367 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 B2MP61769 119 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 SELENOWP63302 87 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 SLC25A46Q96AG3 418 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 FAM120CQ9NX05 1096 aaKnown RBP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 ARL15Q9NXU5 204 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 SLC23A1Q9UHI7 598 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 SMLR1H3BR10 107 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 CBX4O00257 560 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 ACADMP11310 421 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 PRPH2P23942 346 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 ITGB7P26010 798 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 MAP2K3P46734 347 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 ATN1P54259 1190 aaPredicted RBP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 MRPS6P82932 125 aaKnown RBP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 FOXD4Q12950 439 aaPredicted RBP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 SPHARQ15513 63 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 TMC8Q8IU68 726 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 LRRC20Q8TCA0 184 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 CREB3L4Q8TEY5 395 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 MSLNLQ96KJ4 702 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 TRIM45Q9H8W5 580 aaPredicted RBP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 LSM2Q9Y333 95 aaKnown RBP14.38□□□□□ -0.11
XRCC1-201ENST00000262887 HCN4Q9Y3Q4 1203 aa14.38□□□□□ -0.11
XRCC1-201ENST00000262887 H3BUI4 141 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 KDELR3O43731 214 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 CSO75390 466 aaKnown RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 PRAMEF12O95522 483 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 IGLV3-27P01718 113 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 PIPP12273 146 aaPredicted RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 RPS3P23396 243 aaKnown RBP eCLIP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 CFL1P23528 166 aaKnown RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 SSTR4P31391 388 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 HKDC1Q2TB90 917 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 SLC34A3Q8N130 599 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 RNF175Q8N4F7 328 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 SH3KBP1Q96B97 665 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 EID2BQ96D98 161 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 CCDC120Q96HB5 630 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 COPS8Q99627 209 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 ZSCAN5AQ9BUG6 496 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 SPATA9Q9BWV2 254 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 ASB8Q9H765 288 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 RDH14Q9HBH5 336 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 GLTPQ9NZD2 209 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 ZFP37Q9Y6Q3 630 aaPredicted RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 WWP2O00308 870 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 PROM1O43490 865 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 F11P03951 625 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 PCSK2P16519 638 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 RPIAP49247 311 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 BEX3Q00994 111 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 HNRNPA0Q13151 305 aaKnown RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 MAB21L1Q13394 359 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 TUSC3Q13454 348 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 NDUFAF5Q5TEU4 345 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 GLCCI1Q86VQ1 547 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 KIAA1143Q96AT1 154 aaPredicted RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 FAM129BQ96TA1 746 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 MAPKAP1Q9BPZ7 522 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 MCOLN1Q9GZU1 580 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 EIF3KQ9UBQ5 218 aaKnown RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 CLEC2DQ9UHP7 191 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 PCDHB9Q9Y5E1 797 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 YY2O15391 372 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 OR7A10O76100 309 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 LGI1O95970 557 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 TYMPP19971 482 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 PCGF2P35227 344 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 MADCAM1Q13477 382 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 TEAD4Q15561 434 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 IFI44LQ53G44 452 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 GPRC6AQ5T6X5 926 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 DDI2Q5TDH0 399 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 ANGPTL8Q6UXH0 198 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 GPR142Q7Z601 462 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 C11orf65Q8NCR3 313 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 OR8J2Q8NGG1 315 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 OR9Q1Q8NGQ5 310 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 RACGAP1Q9H0H5 632 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 CHST8Q9H2A9 424 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 NDUFB11Q9NX14 153 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 SH3BP4Q9P0V3 963 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 ATPIF1Q9UII2 106 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 NDRG2Q9UN36 371 aaKnown RBP14.37□□□□□ -0.11
XRCC1-201ENST00000262887 AP1M2Q9Y6Q5 423 aa14.37□□□□□ -0.11
XRCC1-201ENST00000262887 ALPK3Q96L96 1907 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 KCNE1BA0A087WTH5 132 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 A8MVJ9 347 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 ATP6V1G2-DDX39BF2Z307 99 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 TSC22D2O75157 780 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 GCM2O75603 506 aaPredicted RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 SCO1O75880 301 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 AP2A2O94973 939 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 IL1AP01583 271 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms