RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 COX15Q7KZN9 410 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 CRLF3Q8IUI8 442 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 FKBP10Q96AY3 582 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 NT5DC2Q9H857 520 aa15.92■□□□□ 0.14
SDCBP-201ENST00000260130 STX18Q9P2W9 335 aaKnown RBP15.92■□□□□ 0.14
SDCBP-201ENST00000260130 MRPS2Q9Y399 296 aaKnown RBP15.92■□□□□ 0.14
SDCBP-201ENST00000260130 KLF7O75840 302 aaPredicted RBP15.91■□□□□ 0.14
SDCBP-201ENST00000260130 CRHR1P34998 444 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 RGS1Q08116 209 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 CDC20Q12834 499 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 E2F2Q14209 437 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 CHI3L2Q15782 390 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 PAGE2BQ5JRK9 111 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 TTLQ8NG68 377 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 NT5CQ8TCD5 201 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 MMABQ96EY8 250 aaPredicted RBP15.91■□□□□ 0.14
SDCBP-201ENST00000260130 LRCH1Q9Y2L9 728 aa15.91■□□□□ 0.14
SDCBP-201ENST00000260130 A0A0A6YYC8 382 aaPredicted RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 CAPN14A8MX76 684 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 B2RBV5 119 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 I3L1I5 382 aaPredicted RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 E2F3O00716 465 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 GLRA3O75311 464 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 KRT36O76013 467 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 CD22P20273 847 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 EEF1DP29692 281 aaKnown RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 PIK3CGP48736 1102 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 SNRPNP63162 240 aaKnown RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 GTF2H2Q13888 395 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 HIST2H2ACQ16777 129 aaPredicted RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 C6orf163Q5TEZ5 329 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 FAM69BQ5VUD6 431 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 HIST2H2AA3Q6FI13 130 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 GTF2H2CQ6P1K8 395 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 LRRC74BQ6ZQY2 392 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 CREB3L4Q8TEY5 395 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 MECRQ9BV79 373 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 SLC26A1Q9H2B4 701 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 ZNF490Q9ULM2 529 aaPredicted RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 SLC22A7Q9Y694 548 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 MDC1Q14676 2089 aaKnown RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 CNOT3O75175 753 aaKnown RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 FBLP22087 321 aaKnown RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 GSTM2P28161 218 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 AVPR1BP47901 424 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 DSG2Q14126 1118 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 ATP1A1-AS1Q5TC04 95 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 GOLGA7Q7Z5G4 137 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 ZCCHC10Q8TBK6 192 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 CATSPER2Q96P56 530 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 SIKE1Q9BRV8 207 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 IPPKQ9H8X2 491 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 ARMCX1Q9P291 453 aa15.9■□□□□ 0.14
SDCBP-201ENST00000260130 PTRH2Q9Y3E5 179 aaKnown RBP15.9■□□□□ 0.14
SDCBP-201ENST00000260130 ANKDD1BA6NHY2 528 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 A8MT66 165 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 CIB2O75838 187 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 NSA2O95478 260 aaKnown RBP15.89■□□□□ 0.13
SDCBP-201ENST00000260130 FURINP09958 794 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 RHDQ02161 417 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 NKG7Q16617 165 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 UGT8Q16880 541 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 DNAL1Q4LDG9 190 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 OR9A4Q8NGU2 314 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 OR2Y1Q8NGV0 311 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 SLC6A16Q9GZN6 736 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 VCXQ9H320 206 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 WDR54Q9H977 334 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 ANKHQ9HCJ1 492 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 CTSFQ9UBX1 484 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 ZNF282Q9UDV7 671 aaPredicted RBP15.89■□□□□ 0.13
SDCBP-201ENST00000260130 TAGLN3Q9UI15 199 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 CDC14CA4D256 554 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 H0YIG0 161 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 SNNO75324 88 aaPredicted RBP15.89■□□□□ 0.13
SDCBP-201ENST00000260130 ENO1P06733 434 aaKnown RBP15.89■□□□□ 0.13
SDCBP-201ENST00000260130 BPGMP07738 259 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 SERPINA6P08185 405 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 IL10RAQ13651 578 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 HERC3Q15034 1050 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 PRSS41Q7RTY9 318 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 NET1Q7Z628 596 aaPredicted RBP15.89■□□□□ 0.13
SDCBP-201ENST00000260130 WDR60Q8WVS4 1066 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 UBE2E3Q969T4 207 aa15.89■□□□□ 0.13
SDCBP-201ENST00000260130 URADA6NGE7 173 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 VSTM2BA6NLU5 285 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 ITGB2P05107 769 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 LINGO3P0C6S8 592 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 IL1RNP18510 177 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 ATP5F1P24539 256 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-201ENST00000260130 FOLR3P41439 243 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 AQP5P55064 265 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 IRX1P78414 480 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-201ENST00000260130 OCA2Q04671 838 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 HYAL2Q12891 473 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 STX3Q13277 289 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 SSPNQ14714 243 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 LIPJQ5W064 366 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 AFAP1L2Q8N4X5 818 aa15.88■□□□□ 0.13
SDCBP-201ENST00000260130 AMER3Q8N944 861 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms