RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 BIKQ13323 160 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 HNF4GQ14541 408 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 LLGL1Q15334 1064 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SNAPC1Q16533 368 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 MOGAT2Q3SYC2 334 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 MTFR2Q6P444 385 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 B3GNT9Q6UX72 402 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 LINGO2Q7L985 606 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 PXKQ7Z7A4 578 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 C8orf58Q8NAV2 365 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 OR4C15Q8NGM1 316 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 ITFG1Q8TB96 612 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SETD6Q8TBK2 473 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 TMBIM1Q969X1 311 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 ADAM2Q99965 735 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM175Q9BSA9 504 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SUCNR1Q9BXA5 334 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SDCBP2Q9H190 292 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 MUC13Q9H3R2 512 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 BCO1Q9HAY6 547 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 PAK1IP1Q9NWT1 392 aaPredicted RBP7.46□□□□□ -1.21
GPNMB-201ENST00000258733 METTL1Q9UBP6 276 aaKnown RBP7.46□□□□□ -1.21
GPNMB-201ENST00000258733 ZDHHC2Q9UIJ5 367 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 SLC5A6Q9Y289 635 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 MAB21L2Q9Y586 359 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 PCDHB7Q9Y5E2 793 aa7.46□□□□□ -1.21
GPNMB-201ENST00000258733 DISP2A7MBM2 1401 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 A6NLC8 198 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 WASH4PA8MWX3 477 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 PPP6CO00743 305 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 SOCS6O14544 535 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 GABARAPO95166 117 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 ADRA1DP25100 572 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 YWHABP31946 246 aaKnown RBP7.46□□□□□ -1.22
GPNMB-201ENST00000258733 ICAM3P32942 547 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 MSX2P35548 267 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-201ENST00000258733 HTR5AP47898 357 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 FGF8P55075 233 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-201ENST00000258733 CTSWP56202 376 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 MAB21L1Q13394 359 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 VPS26BQ4G0F5 336 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 GXYLT1Q4G148 440 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 C14orf28Q4W4Y0 310 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 EPHA10Q5JZY3 1008 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 KDM4DQ6B0I6 523 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 SYVN1Q86TM6 617 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 OFCC1Q8IZS5 231 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 RDH10Q8IZV5 341 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 PARP16Q8N5Y8 322 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 BPIFCQ8NFQ6 507 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 RAB24Q969Q5 203 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 CPNE2Q96FN4 548 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-201ENST00000258733 DPCDQ9BVM2 203 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-201ENST00000258733 FBXO44Q9H4M3 255 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 KCMF1Q9P0J7 381 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 PRR36Q9H6K5 1346 aa7.46□□□□□ -1.22
GPNMB-201ENST00000258733 SMLR1H3BR10 107 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 COPEO14579 308 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 PDCD5O14737 125 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 SOX15O60248 233 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 KRT33AO76009 404 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 ALPPP05187 535 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 GIMD1P0DJR0 217 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 ARSBP15848 533 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 PSMB6P28072 239 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 PTGER2P43116 358 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 GRK6P43250 576 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 PKIAP61925 76 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 DEFA5Q01523 94 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 CAV1Q03135 178 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 RPA4Q13156 261 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 DGCR6Q14129 220 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 ARHGEF7Q14155 803 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 DRAP1Q14919 205 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-201ENST00000258733 SLC9A3R2Q15599 337 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 ADIPOQQ15848 244 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 ADPRMQ3LIE5 342 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 FASTKD1Q53R41 847 aaKnown RBP7.45□□□□□ -1.22
GPNMB-201ENST00000258733 C9orf64Q5T6V5 341 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 RNF165Q6ZSG1 346 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 PRSS48Q7RTY5 328 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 LCORLQ8N3X6 602 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 SFRP1Q8N474 314 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 FAM160A2Q8N612 972 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-201ENST00000258733 OR8D4Q8NGM9 314 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 APBB2Q92870 758 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF778Q96MU6 729 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 RBP7Q96R05 134 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 HSD17B14Q9BPX1 270 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 CNPPD1Q9BV87 410 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 CHRDQ9H2X0 955 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 LHX9Q9NQ69 397 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 SAE1Q9UBE0 346 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-201ENST00000258733 SCP2D1Q9UJQ7 156 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 CLCA3PQ9Y6N3 262 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 LTN1O94822 1766 aa7.45□□□□□ -1.22
GPNMB-201ENST00000258733 TEX13DA0A0J9YY54 714 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-201ENST00000258733 CBY3A6NI87 242 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms