RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SPINT3P49223 89 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 MEF2AQ02078 507 aaPredicted RBP18.27■□□□□ 0.52
PTPRE-201ENST00000254667 KIAA0319Q5VV43 1072 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 MEDAGQ5VYS4 303 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 KLHDC10Q6PID8 442 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 MARCH9Q86YJ5 346 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 MCHR1Q99705 422 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 SLCO3A1Q9UIG8 710 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 NOS1APO75052 506 aaPredicted RBP18.27■□□□□ 0.52
PTPRE-201ENST00000254667 OR3A3P47888 321 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 OR3A2P47893 321 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 TUBA1BP68363 451 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 TUBA4AP68366 448 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 HYAL2Q12891 473 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 CST6Q15828 149 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 TUBA1AQ71U36 451 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 AIG1Q9NVV5 245 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 ZDHHC7Q9NXF8 308 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 CHRM5P08912 532 aaPredicted RBP18.27■□□□□ 0.52
PTPRE-201ENST00000254667 C6P13671 934 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 TBPL1P62380 186 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 YIPF7Q8N8F6 280 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTPRE-201ENST00000254667 TMEM234Q8WY98 164 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 MMABQ96EY8 250 aaPredicted RBP18.27■□□□□ 0.52
PTPRE-201ENST00000254667 OR8D2Q9GZM6 311 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 XKR8Q9H6D3 395 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 GIMAP2Q9UG22 337 aa18.27■□□□□ 0.52
PTPRE-201ENST00000254667 VSTM5A8MXK1 200 aa18.27■□□□□ 0.51
PTPRE-201ENST00000254667 LDB2O43679 373 aa18.27■□□□□ 0.51
PTPRE-201ENST00000254667 HK1P19367 917 aa18.27■□□□□ 0.51
PTPRE-201ENST00000254667 VSX2P58304 361 aaPredicted RBP18.27■□□□□ 0.51
PTPRE-201ENST00000254667 DNAJA4Q8WW22 397 aaPredicted RBP18.27■□□□□ 0.51
PTPRE-201ENST00000254667 TMEM125Q96AQ2 219 aa18.27■□□□□ 0.51
PTPRE-201ENST00000254667 IFI30P13284 250 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 DRD2P14416 443 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TMEM17Q86X19 198 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 ERI1Q8IV48 349 aaKnown RBP18.26■□□□□ 0.51
PTPRE-201ENST00000254667 SCML4Q8N228 414 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 CCDC106Q9BWC9 280 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 PDE7BQ9NP56 450 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 GRHPRQ9UBQ7 328 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 SCML1Q9UN30 329 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TEX46H3BTG2 121 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 EMC8O43402 210 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 HTR1EP28566 365 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 DSG2Q14126 1118 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 MANEALQ5VSG8 457 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 GHDCQ8N2G8 530 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 NKD1Q969G9 470 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 KIAA1143Q96AT1 154 aaPredicted RBP18.26■□□□□ 0.51
PTPRE-201ENST00000254667 SCRN2Q96FV2 425 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TCHHQ07283 1943 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 SLC6A9P48067 706 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 CLLU1OSQ5K130 101 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 ANKRD26P1Q6NSI1 321 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 AMIGO1Q86WK6 493 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 APCDD1Q8J025 514 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 NPWQ8N729 165 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 ADAMTS18Q8TE60 1221 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TRNAU1APQ9NX07 287 aaKnown RBP18.26■□□□□ 0.51
PTPRE-201ENST00000254667 MARCH4Q9P2E8 410 aaPredicted RBP18.26■□□□□ 0.51
PTPRE-201ENST00000254667 SEC14L4Q9UDX3 406 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TLX2O43763 284 aaPredicted RBP18.26■□□□□ 0.51
PTPRE-201ENST00000254667 RPL6Q02878 288 aaKnown RBP18.26■□□□□ 0.51
PTPRE-201ENST00000254667 COLEC12Q5KU26 742 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 CEP97Q8IW35 865 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 ANKFN1Q8N957 763 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TMEM80Q96HE8 168 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 RBP7Q96R05 134 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TMLHEQ9NVH6 421 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 MEMO1Q9Y316 297 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 PCDHB3Q9Y5E6 796 aa18.26■□□□□ 0.51
PTPRE-201ENST00000254667 TP53I11O14683 189 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 DUX1O43812 170 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 IL3P08700 152 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 BCKDHAP12694 445 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 MAPK3P27361 379 aaPredicted RBP18.25■□□□□ 0.51
PTPRE-201ENST00000254667 ALG1LQ6GMV1 187 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 ARL9Q6T311 187 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 NXPE4Q6UWF7 544 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 MARCH7Q9H992 704 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 GIN1Q9NXP7 522 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 KHNYNO15037 678 aaKnown RBP18.25■□□□□ 0.51
PTPRE-201ENST00000254667 FHP07954 510 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 PEPDP12955 493 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 HSDL2Q6YN16 418 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 OR2L3Q8NG85 312 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 GPR34Q9UPC5 381 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 EXOSC1Q9Y3B2 195 aaKnown RBP18.25■□□□□ 0.51
PTPRE-201ENST00000254667 IGLON5A6NGN9 336 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 EEDO75530 441 aaKnown RBP18.25■□□□□ 0.51
PTPRE-201ENST00000254667 ARHGEF15O94989 841 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 AK1P00568 194 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 CDKN2DP55273 166 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 FLYWCH1Q4VC44 716 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 AKIRIN2Q53H80 203 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 HACD2Q6Y1H2 254 aa18.25■□□□□ 0.51
PTPRE-201ENST00000254667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.25■□□□□ 0.51
PTPRE-201ENST00000254667 DEFB119Q8N690 84 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms