RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 B3GNT5Q9BYG0 378 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 LRRN3Q9H3W5 708 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 ACP6Q9NPH0 428 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 GPR34Q9UPC5 381 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 DNMT3AQ9Y6K1 912 aaPredicted RBP10.76□□□□□ -0.69
MSH6-201ENST00000234420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.76□□□□□ -0.699e-9■■■■■ 31
MSH6-201ENST00000234420 IFNA5P01569 189 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PRDX6P30041 224 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 HNRNPKP61978 463 aaKnown RBP eCLIP10.76□□□□□ -0.69
MSH6-201ENST00000234420 NPAS4Q8IUM7 802 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 FTMTQ8N4E7 242 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 OR10G2Q8NGC3 310 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 GAB3Q8WWW8 586 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PKP2Q99959 881 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 CHRAC1Q9NRG0 131 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 SDHAF3Q9NRP4 125 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 LRRC42Q9Y546 428 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 PCDHGC4Q9Y5F7 938 aa10.76□□□□□ -0.69
MSH6-201ENST00000234420 ANKRD63C9JTQ0 380 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 BLOC1S5-TXNDC5H3BN57 136 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 PRAMEF12O95522 483 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CHRNA4P43681 627 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 CDK18Q07002 472 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 PON3Q15166 354 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ATG9BQ674R7 924 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TMEM225Q6GV28 225 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ZNF767PQ75MW2 155 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 PDSS2Q86YH6 399 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 RBFAQ8N0V3 343 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TMEM151AQ8N4L1 468 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TFB2MQ9H5Q4 396 aaKnown RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 SYN3O14994 580 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 RRP8O43159 456 aaKnown RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 APOA2P02652 100 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 RAB6AP20340 208 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 FAM122CQ6P4D5 195 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CFAP77Q6ZQR2 320 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ST7LQ8TDW4 575 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CANT1Q8WVQ1 401 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ZNF578Q96N58 590 aaPredicted RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 KCNK13Q9HB14 408 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ATP6V1G2-DDX39BF2Z307 99 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 RENP00797 406 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 HERV-K104P61576 105 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 GBE1Q04446 702 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ESCO2Q56NI9 601 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 SFT2D3Q587I9 215 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 SLC24A5Q71RS6 500 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TICAM1Q8IUC6 712 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 SAMD12Q8N8I0 201 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CPT1BQ92523 772 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 C7orf26Q96N11 449 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TNFRSF10DQ9UBN6 386 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ERVK-7P63135 1459 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 MYH7BA7E2Y1 1941 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 YDJCA8MPS7 323 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ALOX15BO15296 676 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 DNAJA2O60884 412 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TGFB1P01137 390 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CERS1P27544 350 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CSKP41240 450 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 FMO1Q01740 532 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 NNATQ16517 81 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 MANEAQ5SRI9 462 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 COG8Q96MW5 612 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 GKN1Q9NS71 199 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 SLC7A8Q9UHI5 535 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 PCDHGB6Q9Y5F9 930 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 FGF10O15520 208 aaPredicted RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 CLIC3O95833 236 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TACSTD2P09758 323 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 OR8U9P0C7N5 309 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 BCKDHAP12694 445 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 RBMXP38159 391 aaKnown RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 RAB28P51157 221 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ATP6V0D1P61421 351 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 SGCAQ16586 387 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ROPN1LQ96C74 230 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 AGO3Q9H9G7 860 aaKnown RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 ADAP2Q9NPF8 381 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TDP1Q9NUW8 608 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 TLR4O00206 839 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CH25HO95992 272 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 MAMLD1Q13495 774 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 C9orf57Q5W0N0 161 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ANKRD13BQ86YJ7 626 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 OR9K2Q8NGE7 335 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ZNF486Q96H40 463 aaPredicted RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 MSLNLQ96KJ4 702 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 ADAD1Q96M93 576 aaKnown RBP10.75□□□□□ -0.69
MSH6-201ENST00000234420 SMURF2Q9HAU4 748 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 CAMK2AQ9UQM7 478 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 PCDHGB7Q9Y5F8 929 aa10.75□□□□□ -0.69
MSH6-201ENST00000234420 LILRB5O75023 590 aa10.74□□□□□ -0.69
MSH6-201ENST00000234420 ATP5A1P25705 553 aaKnown RBP10.74□□□□□ -0.69
MSH6-201ENST00000234420 PRKXP51817 358 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms