RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 A0A075B6Q4 140 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CBX4O00257 560 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 TNFRSF11BO00300 401 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 WNT9AO14904 365 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CLDN11O75508 207 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 KLKB1P03952 638 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 RHOCP08134 193 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CTRB1P17538 263 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 ATP5C1P36542 298 aaKnown RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 SLC11A2P49281 568 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 RORCP51449 518 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 RUNX1T1Q06455 604 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ASAH1Q13510 395 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ZMYND11Q15326 602 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 TOR1AIP1Q5JTV8 583 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CTRB2Q6GPI1 263 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 CDH24Q86UP0 819 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 PLCZ1Q86YW0 608 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 SLC34A3Q8N130 599 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 PANX1Q96RD7 426 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ADGRE3Q9BY15 652 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 GABARAPL3Q9BY60 117 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
SF1-201ENST00000227503 ACPTQ9BZG2 426 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 C12orf10Q9HB07 376 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 MARCH5Q9NX47 278 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 ZNF224Q9NZL3 707 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 PCDHGA2Q9Y5H1 932 aa13.54□□□□□ -0.24
SF1-201ENST00000227503 OTCP00480 354 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 SEMG1P04279 462 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 IGFBP1P08833 259 aaPredicted RBP13.53□□□□□ -0.24
SF1-201ENST00000227503 GABRB1P18505 474 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 TNNI3P19429 210 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 ARF5P84085 180 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 PPIGQ13427 754 aaKnown RBP eCLIP13.53□□□□□ -0.245e-11■□□□□ 9.8
SF1-201ENST00000227503 LARS2Q15031 903 aaKnown RBP13.53□□□□□ -0.24
SF1-201ENST00000227503 P2RY14Q15391 338 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 GLYR1Q49A26 553 aaPredicted RBP13.53□□□□□ -0.24
SF1-201ENST00000227503 IQCCQ4KMZ1 466 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 TMEM65Q6PI78 240 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 TCTE3Q8IZS6 198 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 GALNT6Q8NCL4 622 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 GALNT11Q8NCW6 608 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 OR6C4Q8NGE1 309 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 OR9Q1Q8NGQ5 310 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 SH3KBP1Q96B97 665 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 EID2BQ96D98 161 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 C3orf14Q9HBI5 128 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 C11orf16Q9NQ32 467 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 PLOD3O60568 738 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 ARHGEF15O94989 841 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 APOL3O95236 402 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 C1QBP02746 253 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 ZNF30P17039 623 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 DBPQ10586 325 aaPredicted RBP13.53□□□□□ -0.24
SF1-201ENST00000227503 TNK1Q13470 666 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 GANABQ14697 944 aaKnown RBP13.53□□□□□ -0.24
SF1-201ENST00000227503 EXOC3L2Q2M3D2 409 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 RTP2Q5QGT7 225 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 C22orf42Q6IC83 251 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 ZNF367Q7RTV3 350 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 PHF21AQ96BD5 680 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 ZBED6CLQ96FA7 236 aaPredicted RBP13.53□□□□□ -0.24
SF1-201ENST00000227503 C7orf34Q96L11 122 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 MAGEB10Q96LZ2 347 aaPredicted RBP13.53□□□□□ -0.24
SF1-201ENST00000227503 DNAJC27Q9NZQ0 273 aa13.53□□□□□ -0.24
SF1-201ENST00000227503 FPGTO14772 594 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 PRKACAP17612 351 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 CST5P28325 142 aaPredicted RBP13.52□□□□□ -0.24
SF1-201ENST00000227503 FLT3LGP49771 235 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 KCNJ10P78508 379 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 SPIBQ01892 262 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 NCEH1Q6PIU2 408 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 ANGPTL8Q6UXH0 198 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 PLEKHM3Q6ZWE6 761 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 LGI4Q8N135 537 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 CLDN19Q8N6F1 224 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 APOLD1Q96LR9 279 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 RAD9AQ99638 391 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 PLCXD1Q9NUJ7 323 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 WWOXQ9NZC7 414 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 IL17CQ9P0M4 197 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 COMMD3Q9UBI1 195 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 HCSTQ9UBK5 93 aa13.52□□□□□ -0.24
SF1-201ENST00000227503 EIF3KQ9UBQ5 218 aaKnown RBP13.52□□□□□ -0.24
SF1-201ENST00000227503 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.52□□□□□ -0.25
SF1-201ENST00000227503 GTPBP1O00178 669 aaKnown RBP13.52□□□□□ -0.25
SF1-201ENST00000227503 PSIP1O75475 530 aaKnown RBP13.52□□□□□ -0.25
SF1-201ENST00000227503 PDYNP01213 254 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 OLR1P78380 273 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 TAGLNQ01995 201 aaKnown RBP13.52□□□□□ -0.25
SF1-201ENST00000227503 ZNF177Q13360 481 aaPredicted RBP13.52□□□□□ -0.25
SF1-201ENST00000227503 LRRC32Q14392 662 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 LEXMQ3ZCV2 418 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms