RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 PRRC2CQ9Y520 2896 aaKnown RBP16.42■□□□□ 0.22
MRPL28-201ENST00000199706 TNRC6AQ8NDV7 1962 aaKnown RBP16.41■□□□□ 0.22
MRPL28-201ENST00000199706 NSG1A0A0A6YYJ2 146 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 BLACEA4D250 179 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 ZNF860A6NHJ4 632 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 FOXE1O00358 373 aaPredicted RBP16.41■□□□□ 0.22
MRPL28-201ENST00000199706 OR7A17O14581 309 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 FFAR3O14843 346 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 GPR42O15529 346 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 SUV39H1O43463 412 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 B3GALT2O43825 422 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 CLDN9O95484 217 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 PYGBP11216 843 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 ATP5F1P24539 256 aaPredicted RBP16.41■□□□□ 0.22
MRPL28-201ENST00000199706 EFNA3P52797 238 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 MTTPP55157 894 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 TRAF3Q13114 568 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 MINDY4Q4G0A6 757 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 IRAK1BP1Q5VVH5 260 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 ADNP2Q6IQ32 1131 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 JMJD6Q6NYC1 403 aaPredicted RBP16.41■□□□□ 0.22
MRPL28-201ENST00000199706 CHSY3Q70JA7 882 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 MYRIPQ8NFW9 859 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 CCT6BQ92526 530 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 TM9SF4Q92544 642 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 CCDC126Q96EE4 140 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 PHF21BQ96EK2 531 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 PEX11GQ96HA9 241 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 CENPKQ9BS16 269 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 NUDT9Q9BW91 350 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 DMRT3Q9NQL9 472 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 MKS1Q9NXB0 559 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 TBK1Q9UHD2 729 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 LGALS13Q9UHV8 139 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 STK38LQ9Y2H1 464 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 MMACHCQ9Y4U1 282 aa16.41■□□□□ 0.22
MRPL28-201ENST00000199706 GCN1Q92616 2671 aaKnown RBP16.41■□□□□ 0.22
MRPL28-201ENST00000199706 IGKV3D-11A0A0A0MRZ8 115 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 LRRC14BA6NHZ5 514 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 PSMD12O00232 456 aaPredicted RBP16.4■□□□□ 0.22
MRPL28-201ENST00000199706 DPM1O60762 260 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 JRKO75564 520 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 OTCP00480 354 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 PDGFAP04085 211 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 SERPINA7P05543 415 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 KRT15P19012 456 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 CRHR1P34998 444 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 CCT5P48643 541 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 CUL3Q13618 768 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 PCOLCEQ15113 449 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 CCDC153Q494R4 210 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 DEPDC1Q5TB30 811 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 KHDRBS2Q5VWX1 349 aaKnown RBP16.4■□□□□ 0.22
MRPL28-201ENST00000199706 IGFL2Q6UWQ7 119 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 KBTBD2Q8IY47 623 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 CA13Q8N1Q1 262 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 C7orf57Q8NEG2 295 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 HUS1BQ8NHY5 278 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 WDR20Q8TBZ3 569 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 RDH11Q8TC12 318 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 EPS8L3Q8TE67 593 aaKnown RBP16.4■□□□□ 0.22
MRPL28-201ENST00000199706 L3HYPDHQ96EM0 354 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 IMMP1LQ96LU5 166 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 TMEM109Q9BVC6 243 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 ZNF552Q9H707 407 aaPredicted RBP16.4■□□□□ 0.22
MRPL28-201ENST00000199706 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
MRPL28-201ENST00000199706 ZBTB26Q9HCK0 441 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 LYRM4Q9HD34 91 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 PRDM7Q9NQW5 492 aa16.4■□□□□ 0.22
MRPL28-201ENST00000199706 ZNF71Q9NQZ8 489 aaPredicted RBP16.4■□□□□ 0.22
MRPL28-201ENST00000199706 HEMK1Q9Y5R4 338 aaPredicted RBP16.4■□□□□ 0.22
MRPL28-201ENST00000199706 CPAMD8Q8IZJ3 1885 aa16.39■□□□□ 0.22
MRPL28-201ENST00000199706 K7EM74 188 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 SEMA3DO95025 777 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 PTX3P26022 381 aaPredicted RBP16.39■□□□□ 0.21
MRPL28-201ENST00000199706 CASRP41180 1078 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 SLCO1A2P46721 670 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 CCNG1P51959 295 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 PRKAA2P54646 552 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 RAB38P57729 211 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 BTN3A2P78410 334 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 SLC18A2Q05940 514 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 ABRAXAS2Q15018 415 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 TERF2Q15554 542 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 PLAG1Q6DJT9 500 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 ATG14Q6ZNE5 492 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 CPEB2Q7Z5Q1 589 aaKnown RBP16.39■□□□□ 0.21
MRPL28-201ENST00000199706 OR52B6Q8NGF0 335 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 C8orf44Q96CB5 159 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 ZNF382Q96SR6 550 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 PARD6BQ9BYG5 372 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 COPS7BQ9H9Q2 264 aaPredicted RBP16.39■□□□□ 0.21
MRPL28-201ENST00000199706 ZNF160Q9HCG1 818 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 PRDM9Q9NQV7 894 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 GRID1Q9ULK0 1009 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 DAPP1Q9UN19 280 aa16.39■□□□□ 0.21
MRPL28-201ENST00000199706 MRPS33Q9Y291 106 aaKnown RBP16.39■□□□□ 0.21
MRPL28-201ENST00000199706 MYO18BQ8IUG5 2567 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms