RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SYT14Q8NB59 555 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 TBC1D20Q96BZ9 403 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 A0A0B4J293 547 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 PSIP1O75475 530 aaKnown RBP19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 F11P03951 625 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 CSF3P09919 207 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 TYMPP19971 482 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 CCR7P32248 378 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 OR3A3P47888 321 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 TRIQKQ629K1 86 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 TYW3Q6IPR3 259 aaKnown RBP19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 VWA5B2Q8N398 1253 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 PHF21AQ96BD5 680 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 RNF31Q96EP0 1072 aa19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 TRIM45Q9H8W5 580 aaPredicted RBP19.28■□□□□ 0.68
PPP1R3F-201ENST00000055335 MYO10Q9HD67 2058 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 ACRV1P26436 265 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 CHI3L1P36222 383 aaPredicted RBP19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 MAN2A2P49641 1150 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 PSPHP78330 225 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 SCARB2Q14108 478 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 IER5LQ5T953 404 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 ALG1LQ6GMV1 187 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 RNF130Q86XS8 419 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 CCDC28AQ8IWP9 274 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 IQCF1Q8N6M8 205 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 TCEANCQ8N8B7 351 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 RASSF5Q8WWW0 418 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 FAM240BA0A1B0GVZ2 78 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 SCN2BO60939 215 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 CLDN11O75508 207 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 OR2B3O76000 313 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 ZNF865P0CJ78 1059 aaPredicted RBP19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 HOXB9P17482 250 aaPredicted RBP19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 ALDH6A1Q02252 535 aaKnown RBP19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 FAPQ12884 760 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 NCEH1Q6PIU2 408 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 OR8H1Q8NGG4 311 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 CCDC120Q96HB5 630 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 ZIC5Q96T25 663 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 P2RY13Q9BPV8 354 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 PCDH10Q9P2E7 1040 aa19.27■□□□□ 0.68
PPP1R3F-201ENST00000055335 OR10H3O60404 316 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 CSO75390 466 aaKnown RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 GCM2O75603 506 aaPredicted RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 ABRQ12979 859 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 CDH18Q13634 790 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 EIF4HQ15056 248 aaKnown RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 HJURPQ8NCD3 748 aaPredicted RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 SETD6Q8TBK2 473 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 WBP2Q969T9 261 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 ASIC5Q9NY37 505 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 HCN4Q9Y3Q4 1203 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 GREB1Q4ZG55 1949 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 PRAMEF33A0A0G2JMD5 474 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 PRAMEF25A6NGN4 478 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 RFXAPO00287 272 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 PRAMEF10O60809 474 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 NOS1APO75052 506 aaPredicted RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 SDC2P34741 201 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 HNF1BP35680 557 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 MC1RQ01726 317 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 LARS2Q15031 903 aaKnown RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 C5orf22Q49AR2 442 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 PRR23CQ6ZRP0 262 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 WDR53Q7Z5U6 358 aaPredicted RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 C9orf43Q8TAL5 461 aaPredicted RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 POP5Q969H6 163 aaKnown RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 HDHD5Q9BXW7 423 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 FAM83DQ9H4H8 585 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 DNAJC11Q9NVH1 559 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 SPIN1Q9Y657 262 aaPredicted RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 SMAD6O43541 496 aaKnown RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 C6orf47O95873 294 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 PTPN5P54829 565 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 VEZF1Q14119 521 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 NPAS3Q8IXF0 933 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 NATD1Q8N6N6 113 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 NLGN4YQ8NFZ3 816 aaPredicted RBP19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 HCAR2Q8TDS4 363 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 MED30Q96HR3 178 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 RNF170Q96K19 258 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 RAD9AQ99638 391 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 TVP23BQ9NYZ1 205 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 HCSTQ9UBK5 93 aa19.26■□□□□ 0.67
PPP1R3F-201ENST00000055335 MYO16Q9Y6X6 1858 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 TLR4O00206 839 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 TBL1XO60907 577 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 ZNF780AO75290 641 aaPredicted RBP19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 CD9P21926 228 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 AOAHP28039 575 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 CRISP1P54107 249 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 TAF12Q16514 161 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 SLC35A5Q9BS91 424 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 TTLL2Q9BWV7 592 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 LINC00597Q9H2U6 94 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 NMNAT1Q9HAN9 279 aaPredicted RBP19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 C3orf14Q9HBI5 128 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 ASAH2Q9NR71 780 aa19.25■□□□□ 0.67
PPP1R3F-201ENST00000055335 CTPS2Q9NRF8 586 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms