RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Olfr353Q8VGK0 311 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Spz1Q99MY0 378 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Lamtor5Q9D1L9 91 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 9030624G23RikQ9D308 155 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 CtsrQ9JIA9 334 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tdp2Q9JJX7 370 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ap1m2Q9WVP1 423 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr171G5E8J1 314 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Bcl6P41183 707 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 CtskP55097 329 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cdkn2cQ60772 168 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Adamts16Q69Z28 1222 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr1391Q8VFA4 311 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr96Q8VFE3 313 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Exosc7Q9D0M0 291 aaKnown RBP11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nmrk2Q9D7C9 195 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Aldh7a1Q9DBF1 539 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tia1P52912 386 aaKnown RBP11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rin3P59729 980 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Eef2kmtQ3UZW7 335 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 HhipQ7TN16 700 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr801Q8VEU1 318 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr666Q8VH00 318 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 RhagQ9QUT0 438 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Znf382B2RXC5 579 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Vmn2r50E9PW61 861 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Bard1O70445 765 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ckmt1P30275 418 aaKnown RBP11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gpr3P35413 330 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm1123Q1RME4 390 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ankrd13bQ5F259 626 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 JrkQ60976 557 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ei24Q61070 340 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tceal5Q8CCT4 200 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ahsa2Q8N9S3 331 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr103Q920Y8 313 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 DdoQ922Z0 341 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cdrt4Q9DA64 179 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm8882E9Q7E4 283 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm17555F6U8B9 371 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Csf2P01587 141 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gja4P28235 333 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nup43P59235 380 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Traf6P70196 530 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 TgfbiP82198 683 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 GiprQ0P543 460 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Smarcd3Q6P9Z1 483 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Znf32Q80V23 272 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cdkn3Q810P3 211 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Aoc1Q8JZQ5 751 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gsg1Q8R1W2 324 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Uhrf1Q8VDF2 782 aaKnown RBP11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Myl9Q9CQ19 172 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Lysmd1Q9D0E3 226 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tvp23bQ9D8T4 205 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nectin1Q9JKF6 515 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mocs2Q9Z223 189 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Hnrnpa2b1O88569 353 aaKnown RBP11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Rab12P35283 243 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Atp5a1Q03265 553 aaKnown RBP11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 MuskQ61006 868 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 A4galtQ67BJ4 359 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Trim45Q6PFY8 580 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Amigo1Q80ZD8 492 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Znf775Q8BI73 538 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gen1Q8BMI4 908 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr352Q8VGJ9 315 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 MlycdQ99J39 492 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 PigkQ9CXY9 395 aa11.45□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Nr4a1P12813 601 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Scn1bP97952 218 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Stox2Q499E5 926 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Taar8aQ5QD07 344 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Slc39a10Q6P5F6 833 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Fam72aQ8BFZ8 149 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Q8C0X8 640 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Snx11Q91WL6 271 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mrgpra1Q91WW5 304 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mlf2Q99KX1 247 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mospd2Q9CWP6 518 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 4933421I07RikQ9D420 214 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 SmoktcrA2KF29 484 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ccnb1ip1D3Z3K2 276 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr549E9Q542 316 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Zfp946F6VWU8 523 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm6882J3KMT3 313 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 HexaP29416 528 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cdh4P39038 913 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Matn1P51942 500 aaKnown RBP11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Dnaja1P63037 397 aaKnown RBP11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gm10662Q3UT86 313 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Ubfd1Q78JW9 368 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Cldn17Q8BXA6 224 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Trnt1Q8K1J6 434 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Smap1Q91VZ6 440 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Klhdc8aQ91XA8 350 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pycr1Q922W5 309 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gabra4Q9D6F4 552 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tmigd1Q9D7L8 261 aa11.44□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Kat2aQ9JHD2 830 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms