RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, human

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00339-208	ENST00000634934	PPP1R36	Q96LQ0	422 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	FAM192A	Q9GZU8	254 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	RHBG	Q9H310	441 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	FANCE	Q9HB96	536 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	FGF21	Q9NSA1	209 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	STARD5	Q9NSY2	213 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	OCIAD1	Q9NX40	245 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	SLC7A8	Q9UHI5	535 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	ADGRE2	Q9UHX3	823 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	PTGDR2	Q9Y5Y4	395 aa		13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC00339-208	ENST00000634934	MAGEA13P	A6NCF6	341 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	MAGEB17	A8MXT2	336 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	SRPX2	O60687	465 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	TGFB1	P01137	390 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	CTSB	P07858	339 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	LINC00032	P0C843	101 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	GSTM2	P28161	218 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	SERPINB1	P30740	379 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	PIK3CB	P42338	1070 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	GABRA4	P48169	554 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	RPS13	P62277	151 aa	Known RBP	13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	ACY1	Q03154	408 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	UGT3A2	Q3SY77	523 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	ADAMTS14	Q8WXS8	1223 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	USP7	Q93009	1102 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	SPDL1	Q96EA4	605 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	OR6C1	Q96RD1	312 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	CMKLR1	Q99788	373 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	NLN	Q9BYT8	704 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	DMRT3	Q9NQL9	472 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	ARMCX1	Q9P291	453 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	WASF3	Q9UPY6	502 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934	CEP295	Q9C0D2	2601 aa		13.77	□□□□□ -0.21
LINC00339-208	ENST00000634934		A0A088AWK7	358 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	FAM149A	A5PLN7	773 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	SLCO1B7	G3V0H7	640 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	PIP5K1B	O14986	540 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	P2RX6	O15547	441 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	PEX1	O43933	1283 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	CLEC3A	O75596	197 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	SLC35G6	P0C7Q6	338 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	ANPEP	P15144	967 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	RGS1	Q08116	209 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	COL9A2	Q14055	689 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	IMPG1	Q17R60	797 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	HKDC1	Q2TB90	917 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	C10orf62	Q5T681	223 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	RIPOR1	Q6ZS17	1223 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	TMPRSS12	Q86WS5	348 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	HOMEZ	Q8IX15	550 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	ZNF655	Q8N720	491 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	CAMKV	Q8NCB2	501 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	OR1L3	Q8NH93	324 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	CREB3L4	Q8TEY5	395 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	NUF2	Q9BZD4	464 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	SPRTN	Q9H040	489 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	OR51B5	Q9H339	312 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	TUBB1	Q9H4B7	451 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	SIDT1	Q9NXL6	827 aa	Known RBP	13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	VTI1B	Q9UEU0	232 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	SCOC	Q9UIL1	159 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	SERTAD3	Q9UJW9	196 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	KLK13	Q9UKR3	277 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	TSC22D4	Q9Y3Q8	395 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	LOXL2	Q9Y4K0	774 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934	FRY	Q5TBA9	3013 aa		13.76	□□□□□ -0.21
LINC00339-208	ENST00000634934		H0Y3Z8	333 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	FOXE1	O00358	373 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	SAP18	O00422	153 aa	Known RBP	13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	HDAC3	O15379	428 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	AHCYL1	O43865	530 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	OR2B3	O76000	313 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	JUN	P05412	331 aa	Known RBP	13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	FES	P07332	822 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	LINGO3	P0C6S8	592 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	CCL4	P13236	92 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	PTX3	P26022	381 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	IDH3A	P50213	366 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	ITGA1	P56199	1179 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	HMGCS1	Q01581	520 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	PWP1	Q13610	501 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	HERC3	Q15034	1050 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	TOR1AIP1	Q5JTV8	583 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	TCTE1	Q5JU00	501 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	EPGN	Q6UW88	154 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	RAB11FIP2	Q7L804	512 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	GPR135	Q8IZ08	494 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	ZNF501	Q96CX3	271 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	TM4SF19	Q96DZ7	209 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	C19orf60	Q96EN9	201 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	CMTM7	Q96FZ5	175 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	LIN37	Q96GY3	246 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	RILP	Q96NA2	401 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	F2RL3	Q96RI0	385 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	SCNM1	Q9BWG6	230 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	PFDN4	Q9NQP4	134 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	NDE1	Q9NXR1	346 aa		13.75	□□□□□ -0.21
LINC00339-208	ENST00000634934	RARRES3	Q9UL19	164 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms