RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 MED11Q9P086 117 aa12.37□□□□□ -0.43
SCN8A-209ENST00000627620 BAIAP2Q9UQB8 552 aa12.37□□□□□ -0.43
SCN8A-209ENST00000627620 HCN4Q9Y3Q4 1203 aa12.37□□□□□ -0.43
SCN8A-209ENST00000627620 E7EQ34 232 aa12.37□□□□□ -0.43
SCN8A-209ENST00000627620 ZNF648Q5T619 568 aaPredicted RBP12.37□□□□□ -0.43
SCN8A-209ENST00000627620 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
SCN8A-209ENST00000627620 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
SCN8A-209ENST00000627620 VILLO15195 856 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 FGF3P11487 239 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 DIO3P55073 304 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 RING1Q06587 406 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PPP1R3AQ16821 1122 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 C6orf136Q5SQH8 315 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 DPY19L3Q6ZPD9 716 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 ZC3H3Q8IXZ2 948 aaKnown RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 OR4K14Q8NGD5 310 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 TMEM80Q96HE8 168 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 MRGPRX2Q96LB1 330 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PCDHB14Q9Y5E9 798 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 CDRT1O95170 752 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 UQCRC2P22695 453 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 GADD45AP24522 165 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 LEPRP48357 1165 aaKnown RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PRKCDQ05655 676 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 KIAA1614Q5VZ46 1190 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 LIPJQ5W064 366 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 METTL27Q8N6F8 245 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 AURKBQ96GD4 344 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 RAD9AQ99638 391 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 OR51I1Q9H343 314 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 TOR3AQ9H497 397 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 TRPV4Q9HBA0 871 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 FBXO9Q9UK97 447 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 LRRC42Q9Y546 428 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 ITIH1P19827 911 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PTNP21246 168 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 S100A1P23297 94 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 NOXRED1Q6NXP6 359 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 TMPRSS9Q7Z410 1059 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PLCZ1Q86YW0 608 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 TRAM1L1Q8N609 369 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 GLYATL1Q969I3 302 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 SH3YL1Q96HL8 342 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 MCHR1Q99705 422 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 DKKL1Q9UK85 242 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 COL1A1P02452 1464 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 OR2AT4A6NND4 320 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 H3BSA7 217 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 RFPL1O75677 317 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 ITGA5P08648 1049 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 CD1DP15813 335 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 OR1E2P47887 323 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 RPS21P63220 83 aaKnown RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 TRAM2Q15035 370 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 SLC36A4Q6YBV0 504 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 SERINC5Q86VE9 423 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 UMODL1-AS1Q8N2C9 162 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 C15orf40Q8WUR7 153 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 HSPBAP1Q96EW2 488 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 FBXL20Q96IG2 436 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 OR2M4Q96R27 311 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 LDAHQ9H6V9 325 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PTGES2Q9H7Z7 377 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 DNAJC27Q9NZQ0 273 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PCDHGB2Q9Y5G2 931 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 PCDHGA2Q9Y5H1 932 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 LTBP3Q9NS15 1303 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 ZNF860A6NHJ4 632 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 C2orf74A8MZ97 194 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 L7N2F9 121 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 ACRV1P26436 265 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 VAMP2P63027 116 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 NRROSQ86YC3 692 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 LMO3Q8TAP4 145 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 MMABQ96EY8 250 aaPredicted RBP12.36□□□□□ -0.43
SCN8A-209ENST00000627620 RBCK1Q9BYM8 510 aa12.36□□□□□ -0.43
SCN8A-209ENST00000627620 METTL21EPA6NDL7 271 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 TNFRSF10BO14763 440 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 CLEC3AO75596 197 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 GSRP00390 522 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 HEXBP07686 556 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 HTR1AP08908 422 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 ATF6P18850 670 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 VSX2P58304 361 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-209ENST00000627620 POU6F2P78424 691 aaPredicted RBP12.35□□□□□ -0.43
SCN8A-209ENST00000627620 GPRIN1Q7Z2K8 1008 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 CCDC116Q8IYX3 515 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 OR8H3Q8N146 312 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 OSTF1Q92882 214 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 MOAP1Q96BY2 351 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 BORCS6Q96GS4 357 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 MOV10Q9HCE1 1003 aaKnown RBP12.35□□□□□ -0.43
SCN8A-209ENST00000627620 DZANK1Q9NVP4 752 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 CYP8B1Q9UNU6 501 aa12.35□□□□□ -0.43
SCN8A-209ENST00000627620 MGAT4BQ9UQ53 548 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms