RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR1F1O43749 312 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 GALR3O60755 368 aaPredicted RBP13.7□□□□□ -0.22
PNKP-218ENST00000625299 ITGA10O75578 1167 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 ENO3P13929 434 aaPredicted RBP13.7□□□□□ -0.22
PNKP-218ENST00000625299 PAMP19021 973 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 DNASE1P24855 282 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 CLCN2P51788 898 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 SKP1P63208 163 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 GXYLT1Q4G148 440 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 NEPROQ6NW34 567 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 CYHR1Q6ZMK1 362 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 AFAP1L2Q8N4X5 818 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 GPR21Q99679 349 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 FAM129AQ9BZQ8 928 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 CLEC4MQ9H2X3 399 aaPredicted RBP13.7□□□□□ -0.22
PNKP-218ENST00000625299 TIMMDC1Q9NPL8 285 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 PLSCR2Q9NRY7 297 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 INTS10Q9NVR2 710 aaKnown RBP13.7□□□□□ -0.22
PNKP-218ENST00000625299 KCMF1Q9P0J7 381 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 ERVK-11Q9UQG0 969 aa13.7□□□□□ -0.22
PNKP-218ENST00000625299 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 ACOT7O00154 380 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 PSMD12O00232 456 aaPredicted RBP13.69□□□□□ -0.22
PNKP-218ENST00000625299 CEP104O60308 925 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 CTAG2O75638 210 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 MYO1DO94832 1006 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 TUBB4AP04350 444 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 ALOX12P18054 663 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 ACVR2AP27037 513 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 HNF4AP41235 474 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 DGKQP52824 942 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
PNKP-218ENST00000625299 CTBP1Q13363 440 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 NAE1Q13564 534 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 ZNF549Q6P9A3 640 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 AGTRAPQ6RW13 159 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 QSOX2Q6ZRP7 698 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 GSTA5Q7RTV2 222 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 SLC13A5Q86YT5 568 aaPredicted RBP13.69□□□□□ -0.22
PNKP-218ENST00000625299 DENND6AQ8IWF6 608 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 NFAM1Q8NET5 270 aaPredicted RBP13.69□□□□□ -0.22
PNKP-218ENST00000625299 MYRIPQ8NFW9 859 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 CD200R1Q8TD46 325 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 SREK1Q8WXA9 508 aaKnown RBP13.69□□□□□ -0.22
PNKP-218ENST00000625299 KCNJ9Q92806 393 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 NECTIN3Q9NQS3 549 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 ZNF358Q9NW07 568 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 ADAMTS6Q9UKP5 1117 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
PNKP-218ENST00000625299 TCRBV7S3A2A0A539 114 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 TCRBV16S1A1N1A0A5B0 115 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 FIGNL2A6NMB9 653 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 G3V3Y1 287 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 ZFP36L2P47974 494 aaKnown RBP13.68□□□□□ -0.22
PNKP-218ENST00000625299 SSR4P51571 173 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 CCR8P51685 355 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 DLX5P56178 289 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 RAB8AP61006 207 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 RGS1Q08116 209 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 KIF5AQ12840 1032 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 THOC5Q13769 683 aaKnown RBP13.68□□□□□ -0.22
PNKP-218ENST00000625299 ARSKQ6UWY0 536 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 B3GNT6Q6ZMB0 384 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 Q71RC1 249 aaPredicted RBP13.68□□□□□ -0.22
PNKP-218ENST00000625299 ABHD13Q7L211 337 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 WDR53Q7Z5U6 358 aaPredicted RBP13.68□□□□□ -0.22
PNKP-218ENST00000625299 APCDD1LQ8NCL9 501 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 PSD4Q8NDX1 1056 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 ARMC2Q8NEN0 867 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 ZNF669Q96BR6 464 aaPredicted RBP13.68□□□□□ -0.22
PNKP-218ENST00000625299 TTYH2Q9BSA4 534 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 TSGA10Q9BZW7 698 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 PRDM9Q9NQV7 894 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 DEPPQ9NTK1 212 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 SAMD15Q9P1V8 674 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 DHRS7Q9Y394 339 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 LIPGQ9Y5X9 500 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 CAPN6Q9Y6Q1 641 aa13.68□□□□□ -0.22
PNKP-218ENST00000625299 A0A0G2JMM0 328 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 A0A0G2JNJ9 132 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 A0A1W2PPB8 328 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 A0A1W2PRS3 328 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 A8MVJ9 347 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 KIR3DP1A8MWS1 328 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 PROM1O43490 865 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 AVILO75366 819 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 GLI4P10075 376 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 CCND1P24385 295 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
PNKP-218ENST00000625299 LCTLQ6UWM7 567 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 C16orf47Q6ZP98 133 aaPredicted RBP13.67□□□□□ -0.22
PNKP-218ENST00000625299 LIX1LQ8IVB5 337 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 GOT1L1Q8NHS2 421 aaPredicted RBP13.67□□□□□ -0.22
PNKP-218ENST00000625299 CREB3L4Q8TEY5 395 aa13.67□□□□□ -0.22
PNKP-218ENST00000625299 PDLIM2Q96JY6 352 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms