RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 OC90Q02509 493 aaPredicted RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 ACVR1Q04771 509 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 TUBA3CQ13748 450 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 FAM53BQ14153 422 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 OR1C1Q15619 314 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 NDUFA9Q16795 377 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 MEP1AQ16819 746 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SPINK14Q6IE38 97 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 TUBA3EQ6PEY2 450 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 MEX3BQ6ZN04 569 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 LANCL3Q6ZV70 420 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CPEB2Q7Z5Q1 589 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 GHDCQ8N2G8 530 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 HORMAD2Q8N7B1 307 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 ANKRD42Q8N9B4 389 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 PPHLN1Q8NEY8 458 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 SMPDL3AQ92484 453 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 PEX13Q92968 403 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 FAM136AQ96C01 138 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SDCCAG3Q96C92 435 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 OR2A5Q96R48 311 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CYTH2Q99418 400 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SPOCK3Q9BQ16 436 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CCDC77Q9BR77 488 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 HES7Q9BYE0 225 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 FRMD8P1Q9BZ68 369 aaPredicted RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 KCNK13Q9HB14 408 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 ETNK1Q9HBU6 452 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SAYSD1Q9NPB0 183 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 COQ3Q9NZJ6 369 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 MARCH4Q9P2E8 410 aaPredicted RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 TAC3Q9UHF0 121 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 GRID1Q9ULK0 1009 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 TCAF1Q9Y4C2 921 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 NIPBLQ6KC79 2804 aaeCLIP7.38□□□□□ -1.23
CLK1-215ENST00000621181 MAP1AP78559 2803 aaPredicted RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 PRRG2O14669 202 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 ASNA1O43681 348 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CCNDBP1O95273 360 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 APRTP07741 180 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CD1EP15812 388 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CD96P40200 585 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SKIV2L2P42285 1042 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 EFNA3P52797 238 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 KCNJ2P63252 427 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SF3A3Q12874 501 aaKnown RBP eCLIP7.38□□□□□ -1.237e-7■■■□□ 14.6
CLK1-215ENST00000621181 GPS1Q13098 491 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 ANKRD20A4Q4UJ75 823 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 GALNTL5Q7Z4T8 443 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 PAQR7Q86WK9 346 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 LRRC6Q86X45 466 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SLC5A8Q8N695 610 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 GBP7Q8N8V2 638 aaPredicted RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 NAT8LQ8N9F0 302 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 MDS2Q8NDY4 140 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 OR9A1PQ8NGU1 263 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 MCOLN3Q8TDD5 553 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 FRMD6Q96NE9 622 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 ENKD1Q9H0I2 346 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 P2RY12Q9H244 342 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SYNPO2LQ9H987 977 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 PPCSQ9HAB8 311 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SSU72Q9NP77 194 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 KCNK9Q9NPC2 374 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CHRAC1Q9NRG0 131 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SCN3AQ9NY46 2000 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ASPDHA6ND91 283 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ZNF839A8K0R7 811 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 GABRR3A8MPY1 467 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ARHGEF33A8MVX0 844 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 E9PLN8 166 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 H0YIG0 161 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 P2RX6O15547 441 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 MATN4O95460 622 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 NADKO95544 446 aaPredicted RBP7.37□□□□□ -1.23
CLK1-215ENST00000621181 CYC1P08574 325 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ERGP11308 486 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ZNF24P17028 368 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 STIP1P31948 543 aaKnown RBP7.37□□□□□ -1.23
CLK1-215ENST00000621181 FDFT1P37268 417 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 XCR1P46094 333 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 AGTR2P50052 363 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 HSF1Q00613 529 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 PRDX1Q06830 199 aaKnown RBP7.37□□□□□ -1.23
CLK1-215ENST00000621181 ARHGAP19Q14CB8 494 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 EXT1Q16394 746 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 MAPKAPK3Q16644 382 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 PDK4Q16654 411 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 MSS51Q4VC12 460 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.37□□□□□ -1.23
CLK1-215ENST00000621181 THEMIS2Q5TEJ8 643 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ANKRD22Q5VYY1 191 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ZNF425Q6IV72 752 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 H3F3CQ6NXT2 135 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.37□□□□□ -1.23
CLK1-215ENST00000621181 CRLF3Q8IUI8 442 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 MPP5Q8N3R9 675 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 ARHGEF39Q8N4T4 335 aa7.37□□□□□ -1.23
CLK1-215ENST00000621181 PPFIBP2Q8ND30 876 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms