RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 B3GALNT1O75752 331 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 NCR1O76036 304 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 IFNA7P01567 189 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ATF6P18850 670 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ERVFC1P60507 584 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 NOTUMQ6P988 496 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 KDELC1Q6UW63 502 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 RNF175Q8N4F7 328 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CPA6Q8N4T0 437 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ST8SIA4Q92187 359 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 PIGKQ92643 395 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 MYLPFQ96A32 169 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 ART5Q96L15 291 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 PPP1R2P1Q96PQ5 205 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 DCLRE1CQ96SD1 692 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 MRM3Q9HC36 420 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 CRTAC1Q9NQ79 661 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 REV1Q9UBZ9 1251 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 TNPO3Q9Y5L0 923 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 SESN1Q9Y6P5 492 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 MIA3Q5JRA6 1907 aa9.42□□□□□ -0.9
TNFAIP3-210ENST00000620204 MANSC4A6NHS7 340 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 FAM227AF5H4B4 570 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 H0YC42 278 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PLA2G10O15496 165 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 FFAR2O15552 330 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TPST2O60704 377 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 HPGDSO60760 199 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 SNAI1O95863 264 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 DHFRP00374 187 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 APOC3P02656 99 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PRR35P0CG20 571 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 CSTF2P33240 577 aaKnown RBP eCLIP9.41□□□□□ -0.92e-11■■■■■ 54.3
TNFAIP3-210ENST00000620204 AIF1P55008 147 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 CTBP2P56545 445 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 LEXMQ3ZCV2 418 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TOR1AIP1Q5JTV8 583 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TMEM65Q6PI78 240 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 LIPIQ6XZB0 460 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 VN1R5Q7Z5H4 357 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 BBS7Q8IWZ6 715 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PIANPQ8IYJ0 282 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PIAS4Q8N2W9 510 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 UXS1Q8NBZ7 420 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 NT5C3BQ969T7 300 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 OTUB1Q96FW1 271 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TSGA13Q96PP4 275 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 C3orf14Q9HBI5 128 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TMEM30AQ9NV96 361 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TMEM184CQ9NVA4 438 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 KLHL21Q9UJP4 597 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 RAB23Q9ULC3 237 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 ERVW-1Q9UQF0 538 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PCDHGC4Q9Y5F7 938 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 IGKV6-21A0A0C4DH24 114 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 MAGEB17A8MXT2 336 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 FAM220BPB1ANY3 271 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 J3KTA2 159 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TRAPPC2P0DI81 140 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TRAPPC2BP0DI82 140 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 EPB42P16452 691 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 OR1E1P30953 314 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 EFEMP1Q12805 493 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 SSX1Q16384 188 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PUS10Q3MIT2 529 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PSAPL1Q6NUJ1 521 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 SZRD1Q7Z422 152 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 HDDC2Q7Z4H3 204 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 CFAP52Q8N1V2 620 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 AQP11Q8NBQ7 271 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PPA2Q9H2U2 334 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 ASAH2Q9NR71 780 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TVP23BQ9NYZ1 205 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 HCN3Q9P1Z3 774 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 LGALS8O00214 317 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 ENTPD6O75354 484 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 NAGAP17050 411 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 NUP62P37198 522 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 ETV6P41212 452 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 FKBP1BP68106 108 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 ASAH1Q13510 395 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PTGES3Q15185 160 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 IGSF11Q5DX21 431 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 FAM171BQ6P995 826 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 CXCL17Q6UXB2 119 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 KANSL1Q7Z3B3 1105 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 ZNF598Q86UK7 904 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 LAPTM4BQ86VI4 370 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 OR4M2Q8NGB6 313 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 COQ8AQ8NI60 647 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 DNAJB3Q8WWF6 145 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 IMP4Q96G21 291 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 PKP4Q99569 1192 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 NUDT15Q9NV35 164 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 UBQLN2Q9UHD9 624 aa9.41□□□□□ -0.9
TNFAIP3-210ENST00000620204 GJD2Q9UKL4 321 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms