RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 AASDHPPTQ9NRN7 309 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 VNN3Q9NY84 501 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 SCN2AQ99250 2005 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 GCM2O75603 506 aaPredicted RBP13.19□□□□□ -0.3
CPEB1-213ENST00000617462 SCELO95171 688 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 SEMA4FO95754 770 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 LDLRP01130 860 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 SERPIND1P05546 499 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 HYAL2Q12891 473 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 LRRC23Q53EV4 343 aaPredicted RBP13.19□□□□□ -0.3
CPEB1-213ENST00000617462 IYDQ6PHW0 289 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 ZNF793Q6ZN11 406 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 VTCN1Q7Z7D3 282 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 SERPINA11Q86U17 422 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 CARM1Q86X55 608 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 NAGSQ8N159 534 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 ASB12Q8WXK4 309 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 TM4SF18Q96CE8 201 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 LTB4R2Q9NPC1 389 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 TEX10Q9NXF1 929 aaPredicted RBP13.19□□□□□ -0.3
CPEB1-213ENST00000617462 USP36Q9P275 1121 aaKnown RBP13.19□□□□□ -0.3
CPEB1-213ENST00000617462 SPASTQ9UBP0 616 aa13.19□□□□□ -0.3
CPEB1-213ENST00000617462 TMEM229AB2RXF0 380 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 BTN3A3O00478 584 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 RNASET2O00584 256 aaKnown RBP13.18□□□□□ -0.3
CPEB1-213ENST00000617462 PRSS23O95084 383 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 RASAL1O95294 804 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 CHRNB1P11230 501 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 ZNF23P17027 643 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 HSD17B2P37059 387 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 SLC19A1P41440 591 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 ACTR1BP42025 376 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 HNRNPFP52597 415 aaKnown RBP13.18□□□□□ -0.3
CPEB1-213ENST00000617462 PLA2G16P53816 162 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 ACTR1AP61163 376 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
CPEB1-213ENST00000617462 OTUD3Q5T2D3 398 aaPredicted RBP13.18□□□□□ -0.3
CPEB1-213ENST00000617462 CCNYL2Q5T2Q4 361 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 Q6ZSR6 202 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 OR2L3Q8NG85 312 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 UBE2E3Q969T4 207 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 FBXL20Q96IG2 436 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 BHLHE41Q9C0J9 482 aaPredicted RBP13.18□□□□□ -0.3
CPEB1-213ENST00000617462 RAPGEFL1Q9UHV5 662 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 ZNF639Q9UID6 485 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 CA14Q9ULX7 337 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 VPS13AQ96RL7 3174 aa13.18□□□□□ -0.3
CPEB1-213ENST00000617462 RNF103-CHMP3A0A140T963 221 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 KLHL33A6NCF5 533 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 A6NCN8 305 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 NDUFS4O43181 175 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 SNAP29O95721 258 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 RETP07949 1114 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 ETFAP13804 333 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 AQP1P29972 269 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 PTGER1P34995 402 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 CHRNB3Q05901 458 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 RGNQ15493 299 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 VMACQ2NL98 169 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 FAM98BQ52LJ0 330 aaKnown RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 TRIM73Q86UV7 250 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 SHISA5Q8N114 240 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 SYNPOQ8N3V7 929 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 TFAP2CQ92754 450 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 TOE1Q96GM8 510 aaKnown RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 DPH7Q9BTV6 452 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 PHF7Q9BWX1 381 aaPredicted RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 VCXQ9H320 206 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 MRPS30Q9NP92 439 aaKnown RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 ABCG2Q9UNQ0 655 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 EVPLLA8MZ36 301 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 H0YJX3 145 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 DIRAS1O95057 198 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 HOXC4P09017 264 aaPredicted RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 SRP54P61011 504 aaKnown RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 TXNL4AP83876 142 aaKnown RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 C10orf62Q5T681 223 aaPredicted RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 CPZQ66K79 652 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 ABRAXAS1Q6UWZ7 409 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 MFSD2AQ8NA29 543 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 DENND6BQ8NEG7 585 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 TRAPPC9Q96Q05 1148 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 BARD1Q99728 777 aaKnown RBP13.17□□□□□ -0.3
CPEB1-213ENST00000617462 C17orf62Q9BQA9 187 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 SLC35A5Q9BS91 424 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 C9orf16Q9BUW7 83 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 OSBPL11Q9BXB4 747 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 TPSD1Q9BZJ3 242 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 PCBD2Q9H0N5 130 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 MVB12BQ9H7P6 319 aa13.17□□□□□ -0.3
CPEB1-213ENST00000617462 A0A1W2PS29 197 aa13.16□□□□□ -0.3
CPEB1-213ENST00000617462 LRIT2A6NDA9 550 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms