RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 BMP8AQ7Z5Y6 402 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZZZ3Q8IYH5 903 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR5K1Q8NHB7 308 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 C15orf40Q8WUR7 153 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 KCNN1Q92952 543 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC25A36Q96CQ1 311 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 CNDP2Q96KP4 475 aaKnown RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZIC5Q96T25 663 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GPR160Q9UJ42 338 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ADAMTS7Q9UKP4 1686 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TLR4O00206 839 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TNFRSF10CO14798 259 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF28P17035 718 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 BPIP17213 487 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GPLD1P80108 840 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 FADDQ13158 208 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 DEFB133Q30KQ1 61 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF57Q68EA5 555 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 VASH1Q7L8A9 365 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GALNT15Q8N3T1 639 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 PJA1Q8NG27 643 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZUFSPQ96AP4 578 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ORAI3Q9BRQ5 295 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 DPH7Q9BTV6 452 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GRHPRQ9UBQ7 328 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 MYH4Q9Y623 1939 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 DDX60LQ5H9U9 1706 aaKnown RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TCRBV7S2A1N4TA0A589 114 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 EFCAB7A8K855 629 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 FDXRP22570 491 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TIA1P31483 386 aaKnown RBP eCLIP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 RBBP4Q09028 425 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRIM61Q5EBN2 209 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 RBM44Q6ZP01 1051 aaKnown RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TTLL10Q6ZVT0 673 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 IZUMO1Q8IYV9 350 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GAL3ST3Q96A11 431 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 METTL2AQ96IZ6 378 aaKnown RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 RDH14Q9HBH5 336 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 HS3ST2Q9Y278 367 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 CACNA1SQ13698 1873 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 COL5A3P25940 1745 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ADAMTS3O15072 1205 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ATP6V1G2O95670 118 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAP2AP10114 183 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ANPEPP15144 967 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ALOX12P18054 663 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 CD9P21926 228 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 RYKP34925 604 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 IDH3AP50213 366 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 XKP51811 444 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 DLX2Q07687 328 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 FLYWCH1Q4VC44 716 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 GRHL2Q6ISB3 625 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 AMER2Q8N7J2 671 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 FZD3Q9NPG1 666 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM9BQ9NQ34 198 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLCO3A1Q9UIG8 710 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 BOKQ9UMX3 212 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 TEX264Q9Y6I9 313 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 MYH6P13533 1939 aa9.38□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZBTB42B2RXF5 422 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 SAP18O00422 153 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 KHDRBS3O75525 346 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZBTB11O95625 1053 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 AHSGP02765 367 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 TIMP2P16035 220 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 DNAJA1P31689 397 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 DCDC1P59894 354 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 LIN54Q6MZP7 749 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 USP53Q70EK8 1073 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZFAND4Q86XD8 727 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM139Q8IV31 216 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR8H2Q8N162 312 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ARL10Q8N8L6 244 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 MECRQ9BV79 373 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC12A9Q9BXP2 914 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PBX4Q9BYU1 374 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 KLHL21Q9UJP4 597 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 VSTM2BA6NLU5 285 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 DLX3O60479 287 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMEM63AO94886 807 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 BMP4P12644 408 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ARHGDIBP52566 201 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 GBX2P52951 348 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 EMP2P54851 167 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAB8AP61006 207 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 TLR1Q15399 786 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF77Q15935 545 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 CTC1Q2NKJ3 1217 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 FRRS1Q6ZNA5 592 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 TMPPEQ6ZT21 453 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PNPT1Q8TCS8 783 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PWWP2AQ96N64 755 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 FIZ1Q96SL8 496 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 GAREM1Q9H706 876 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms