RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 GLYATL1Q969I3 302 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NEDD4LQ96PU5 975 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RAD9AQ99638 391 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TCF25Q9BQ70 676 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 COPS4Q9BT78 406 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MALT1Q9UDY8 824 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DPP7Q9UHL4 492 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF221Q9UK13 617 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DLGAP4Q9Y2H0 992 aa10.45□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PCM1Q15154 2024 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 COL4A3Q01955 1670 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FADS2P1A8MWK0 482 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NEDD8-MDP1E9PL57 170 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CCL16O15467 120 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 UGT2B11O75310 529 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SCO1O75880 301 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TOP3AQ13472 1001 aaPredicted RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 COL9A2Q14055 689 aaPredicted RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NXNL2Q5VZ03 156 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GTF2IRD2BQ6EKJ0 949 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RFLNAQ6ZTI6 216 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 Q6ZVU0 165 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GTF2IRD2Q86UP8 949 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MMAAQ8IVH4 418 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ADHFE1Q8IWW8 467 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PIK3C3Q8NEB9 887 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SPPL3Q8TCT6 385 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CHTF18Q8WVB6 975 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HDAC2Q92769 488 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PYURFQ96I23 114 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MMP28Q9H239 520 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TIGARQ9NQ88 270 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CORO2BQ9UQ03 480 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PRELID1Q9Y255 219 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CENPXA8MT69 81 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ATG13O75143 517 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LEFTY1O75610 366 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NTRK1P04629 796 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PPIBP23284 216 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IGFBP5P24593 272 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GSTM2P28161 218 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ASMTP46597 345 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TGM4P49221 684 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CLCA4Q14CN2 919 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LIPIQ6XZB0 460 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SLC44A2Q8IWA5 706 aaPredicted RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GALNT12Q8IXK2 581 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LAS2Q8IYD9 372 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SUN5Q8TC36 379 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CTRCQ99895 268 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ABCB9Q9NP78 766 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RPRD1BQ9NQG5 326 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 THG1LQ9NWX6 298 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SAMD4AQ9UPU9 718 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PCDHGB1Q9Y5G3 927 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 M0QX08 132 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CTDSP2O14595 271 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 C1QCP02747 245 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GADD45AP24522 165 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NNMTP40261 264 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SEMG2Q02383 582 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MVKQ03426 396 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PPIGQ13427 754 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■■□□ 18.4
SENP3-EIF4A1-201ENST00000614237 TMEM52BQ4KMG9 183 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TPRG1LQ5T0D9 272 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ARMC4Q5T2S8 1044 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 AGAP7PQ5VUJ5 663 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SHQ1Q6PI26 577 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MBOAT1Q6ZNC8 495 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CYP4Z1Q86W10 505 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 THOC6Q86W42 341 aaKnown RBP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DTX3Q8N9I9 347 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LILRB4Q8NHJ6 448 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TCEAL4Q96EI5 215 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 KCNC2Q96PR1 638 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 VPS29Q9UBQ0 182 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GPR34Q9UPC5 381 aa10.44□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ARHGEF33A8MVX0 844 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ALOX5P09917 674 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CD22P20273 847 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SPIN4Q56A73 249 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FAM209AQ5JX71 171 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LY6G5CQ5SRR4 150 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZCCHC8Q6NZY4 707 aaKnown RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ETFBKMTQ8IXQ9 262 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LRRC56Q8IYG6 542 aaPredicted RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NLGN4XQ8N0W4 816 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CELF5Q8N6W0 485 aaKnown RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 OR6Q1Q8NGQ2 317 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NELL1Q92832 810 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FAM120BQ96EK7 910 aaKnown RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DTD2Q96FN9 168 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 APIPQ96GX9 242 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF514Q96K75 400 aaPredicted RBP10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TSSK3Q96PN8 268 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SGPP1Q9BX95 441 aa10.43□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 OR51E2Q9H255 320 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms