RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 HRASLS5Q96KN8 279 aa13.5□□□□□ -0.25
COL6A1-207ENST00000612273 CDADC1Q9BWV3 514 aa13.5□□□□□ -0.25
COL6A1-207ENST00000612273 MRPL9Q9BYD2 267 aaKnown RBP13.5□□□□□ -0.25
COL6A1-207ENST00000612273 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-207ENST00000612273 GON4LQ3T8J9 2241 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 CLCA1A8K7I4 914 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 FADS2P1A8MWK0 482 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 AP3D1O14617 1153 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 KIAA0513O60268 411 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 MFN2O95140 757 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 PTNP21246 168 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 IDSP22304 550 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 RAE1P78406 368 aaKnown RBP13.49□□□□□ -0.25
COL6A1-207ENST00000612273 DOC2BQ14184 412 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 PTCHD4Q6ZW05 846 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 AKAP14Q86UN6 197 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 FBXO8Q9NRD0 319 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 FAM120CQ9NX05 1096 aaKnown RBP13.49□□□□□ -0.25
COL6A1-207ENST00000612273 ASIC5Q9NY37 505 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 PSORS1C1Q9UIG5 152 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 OSGIN1Q9UJX0 560 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 PLXNA4Q9HCM2 1894 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 NUMA1Q14980 2115 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 AGAP5A6NIR3 686 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 TEX28O15482 410 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 LRRTM2O43300 516 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 SOCS5O75159 536 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 LEFTY1O75610 366 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 INHAP05111 366 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 RPLP0P05388 317 aaKnown RBP13.49□□□□□ -0.25
COL6A1-207ENST00000612273 ACVR2AP27037 513 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 COPZ1P61923 177 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 SLBPQ14493 270 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL6A1-207ENST00000612273 C10orf62Q5T681 223 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-207ENST00000612273 AGAP7PQ5VUJ5 663 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 ERICH5Q6P6B1 374 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 TRMT11Q7Z4G4 463 aaKnown RBP13.49□□□□□ -0.25
COL6A1-207ENST00000612273 SYNPOQ8N3V7 929 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 OR52E4Q8NGH9 312 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 FBLIM1Q8WUP2 373 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 MYDGFQ969H8 173 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 SPNS1Q9H2V7 528 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 ZNF226Q9NYT6 803 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 TMED5Q9Y3A6 229 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 CCL16O15467 120 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 NUAK1O60285 661 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 SERPIND1P05546 499 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 CNR2P34972 360 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 PIK3CBP42338 1070 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 HNMTP50135 292 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 METAP1P53582 386 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 MTAPQ13126 283 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 GRIN2CQ14957 1233 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 DUSP7Q16829 419 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 FAM9CQ8IZT9 166 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 SLC34A3Q8N130 599 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 METTL4Q8N3J2 472 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 EHD1Q9H4M9 534 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 CLEC2DQ9UHP7 191 aa13.49□□□□□ -0.25
COL6A1-207ENST00000612273 ANKDD1BA6NHY2 528 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 KPNA3O00505 521 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-207ENST00000612273 CST5P28325 142 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-207ENST00000612273 GGT2P36268 569 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 SELENOWP63302 87 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 CSTF3Q12996 717 aaKnown RBP13.48□□□□□ -0.25
COL6A1-207ENST00000612273 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
COL6A1-207ENST00000612273 TCEA2Q15560 299 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 SPANXN2Q5MJ10 180 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 FAHD1Q6P587 224 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 ARMCX6Q7L4S7 300 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 GPR65Q8IYL9 337 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 BEX2Q9BXY8 128 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 ABCG4Q9H172 646 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 IL21Q9HBE4 155 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 SNTG1Q9NSN8 517 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 ZNF232Q9UNY5 417 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 PLXNA3P51805 1871 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 LOC110117498-PIK3R3F6TDL0 507 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 ASNA1O43681 348 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 ABLIM3O94929 683 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 GADD45GO95257 159 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 ALOX5P09917 674 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 CBSLP0DN79 551 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 IMPA1P29218 277 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 CBSP35520 551 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 CXCR4P61073 352 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 DBPQ10586 325 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-207ENST00000612273 CNTN1Q12860 1018 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 TRIM60Q495X7 471 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 IQCCQ4KMZ1 466 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 IFI44LQ53G44 452 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 ZMAT1Q5H9K5 638 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 DEF8Q6ZN54 512 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 COMMD6Q7Z4G1 85 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 RBM45Q8IUH3 476 aaKnown RBP13.48□□□□□ -0.25
COL6A1-207ENST00000612273 RASGEF1AQ8N9B8 481 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
COL6A1-207ENST00000612273 PPCDCQ96CD2 204 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms