RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CNDP1Q96KN2 507 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 CDK15Q96Q40 435 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 FRG2BQ96QU4 278 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 SLC29A3Q9BZD2 475 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 REXO4Q9GZR2 422 aaKnown RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 AICDAQ9GZX7 198 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 KLHL31Q9H511 634 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 MKKSQ9NPJ1 570 aaPredicted RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 DMRT3Q9NQL9 472 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ZNF225Q9UK10 706 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 NAALAD2Q9Y3Q0 740 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 MAU2Q9Y6X3 613 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 A0A088AWK7 358 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 A0A1B0GTL3 188 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 BPGMP07738 259 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 DHRS4L1P0CG22 281 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 IL1RNP18510 177 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 TSPAN8P19075 237 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 ZNF10P21506 573 aaPredicted RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 TSFMP43897 325 aaKnown RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 MAGOHP61326 146 aaKnown RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 OCA2Q04671 838 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 ZNF33BQ06732 778 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 GALNT1Q10472 559 aaPredicted RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 IFT88Q13099 833 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 CUL3Q13618 768 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 MPP2Q14168 576 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 NKG7Q16617 165 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 DEFB134Q4QY38 66 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 DEPDC1Q5TB30 811 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 KHDRBS2Q5VWX1 349 aaKnown RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 TRIM40Q6P9F5 258 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 ABHD17CQ6PCB6 329 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 PRSS41Q7RTY9 318 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 METTL27Q8N6F8 245 aaPredicted RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 FAR2Q96K12 515 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 KCNC2Q96PR1 638 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 MTERF1Q99551 399 aaKnown RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 SH3GL2Q99962 352 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 GATA5Q9BWX5 397 aaPredicted RBP13.15□□□□□ -0.3
RNF40-212ENST00000602784 ROGDIQ9GZN7 287 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 KCNK9Q9NPC2 374 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 ACSS2Q9NR19 701 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 C14orf105Q9NVL8 296 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 TRPC4Q9UBN4 977 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 SNX6Q9UNH7 406 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 ZFHX4Q86UP3 3567 aa13.15□□□□□ -0.3
RNF40-212ENST00000602784 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 MAGEB17A8MXT2 336 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 SGK494L7N484 410 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 UBFD1O14562 309 aaKnown RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 ERI3O43414 337 aaKnown RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 NPHS1O60500 1241 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 CNOT3O75175 753 aaKnown RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 OR4F21O95013 312 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 KRT6AP02538 564 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 KRT6BP04259 564 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 CYC1P08574 325 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 ZGLP1P0C6A0 271 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 SERPINB5P36952 375 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 SERPINB4P48594 390 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 KRT6CP48668 564 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 RAB8AP61006 207 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 COL9A2Q14055 689 aaPredicted RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 SSPNQ14714 243 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 SLC9A5Q14940 896 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 UGT8Q16880 541 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 MED25Q71SY5 747 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 OR6Y1Q8NGX8 325 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 METTL6Q8TCB7 284 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 STT3BQ8TCJ2 826 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 AGAP11Q8TF27 550 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 ZBTB9Q96C00 473 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 MIEF2Q96C03 454 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 ATP6V1G3Q96LB4 118 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 QRFPRQ96P65 431 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 IP6K3Q96PC2 410 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 F2RL3Q96RI0 385 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 SPSB2Q99619 263 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 CENPKQ9BS16 269 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 NPLQ9BXD5 320 aaPredicted RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 ELOVL6Q9H5J4 265 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 PRORYQ9H606 182 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 BRF2Q9HAW0 419 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 CPNE5Q9HCH3 593 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 PTRH2Q9Y3E5 179 aaKnown RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 MRPS18BQ9Y676 258 aaKnown RBP13.14□□□□□ -0.31
RNF40-212ENST00000602784 ITPR1Q14643 2758 aa13.14□□□□□ -0.31
RNF40-212ENST00000602784 LAMA5O15230 3695 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 UQCRHLA0A096LP55 91 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 TMEM120BA0PK00 339 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 C4orf51C9J302 202 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 MANBAO00462 879 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 FFAR3O14843 346 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 PCDH17O14917 1159 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 NKX2-8O15522 239 aa13.13□□□□□ -0.31
RNF40-212ENST00000602784 GPR42O15529 346 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms