RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 PCDHGA12O60330 932 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 RASSF9O75901 435 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 KLHL18O94889 574 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 SLC35G6P0C7Q6 338 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 TYRP1P17643 537 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 HNRNPH1P31943 449 aaKnown RBP13.71□□□□□ -0.21
ZNF548-212ENST00000602086 LSSP48449 732 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 CYP4F2P78329 520 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 PUM1Q14671 1186 aaKnown RBP eCLIP13.71□□□□□ -0.21
ZNF548-212ENST00000602086 UGT8Q16880 541 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 ZC3H12BQ5HYM0 836 aaKnown RBP13.71□□□□□ -0.21
ZNF548-212ENST00000602086 SPANXN4Q5MJ08 99 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 WASHC2DQ5SRD0 308 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 ABHD17CQ6PCB6 329 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 UBE3DQ7Z6J8 389 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 TRIM73Q86UV7 250 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 GPR180Q86V85 440 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 PLD3Q8IV08 490 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 FBXW8Q8N3Y1 598 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 ZCCHC7Q8N3Z6 543 aaKnown RBP13.71□□□□□ -0.21
ZNF548-212ENST00000602086 KRTCAP2Q8N6L1 136 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 FAM13CQ8NE31 585 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 WDR48Q8TAF3 677 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 LRRC58Q96CX6 371 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 TCTN2Q96GX1 697 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 EGLN2Q96KS0 407 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 TRAPPC9Q96Q05 1148 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 EBPLQ9BY08 206 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 REEP4Q9H6H4 257 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 PRM3Q9NNZ6 103 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 SPAG4Q9NPE6 437 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 LHX9Q9NQ69 397 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 ATAD3AQ9NVI7 634 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
ZNF548-212ENST00000602086 TMEM181Q9P2C4 612 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 ABCD2Q9UBJ2 740 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 AP3M1Q9Y2T2 418 aa13.71□□□□□ -0.21
ZNF548-212ENST00000602086 IGHV1OR21-1A0A087WYE8 117 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 A0A0A6YYD5 115 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 ARHGAP10A1A4S6 786 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 SRPX2O60687 465 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-212ENST00000602086 CTSVO60911 334 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 ERN1O75460 977 aaKnown RBP13.7□□□□□ -0.22
ZNF548-212ENST00000602086 CFIP05156 583 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 KLK1P06870 262 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 SMIM10L1P0DMW3 83 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 KIR3DL1P43629 444 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 TRPC1P48995 793 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 ELF3P78545 371 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-212ENST00000602086 RIPK1Q13546 671 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 NFYCQ13952 458 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 MAPKAPK3Q16644 382 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 TRIM61Q5EBN2 209 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 PIGGQ5H8A4 983 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 PAGE3Q5JUK9 113 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 CCNYL2Q5T2Q4 361 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 LRIF1Q5T3J3 769 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 ANXA8L1Q5VT79 327 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 TRIM40Q6P9F5 258 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 DLEU7Q6UYE1 221 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 NET1Q7Z628 596 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-212ENST00000602086 ZNF761Q86XN6 746 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-212ENST00000602086 TMEM132CQ8N3T6 1108 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 C19orf47Q8N9M1 422 aaKnown RBP13.7□□□□□ -0.22
ZNF548-212ENST00000602086 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 GTF2H4Q92759 462 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 SMIM10Q96HG1 83 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 ITCHQ96J02 903 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 CNTNAP3BQ96NU0 1288 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 OR52E6Q96RD3 313 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 CNTNAP3Q9BZ76 1288 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 BHLHE41Q9C0J9 482 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-212ENST00000602086 AICDAQ9GZX7 198 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 GAREM1Q9H706 876 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 PRDM7Q9NQW5 492 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 PADI4Q9UM07 663 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 SDK1Q7Z5N4 2213 aa13.7□□□□□ -0.22
ZNF548-212ENST00000602086 MN1Q10571 1320 aaPredicted RBP13.69□□□□□ -0.22
ZNF548-212ENST00000602086 A0A096LPI6 279 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 C9JVG2 144 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 DUX1O43812 170 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 MGRN1O60291 552 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 DNAJA2O60884 412 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 SCN2BO60939 215 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 SH3BGRLO75368 114 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 CIB2O75838 187 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 KCNH1O95259 989 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 C9P02748 559 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 FURINP09958 794 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 COX7A2P14406 83 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 DRD2P14416 443 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 CDH3P22223 829 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 DGKQP52824 942 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 MAPK12P53778 367 aa13.69□□□□□ -0.22
ZNF548-212ENST00000602086 KLC1Q07866 573 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms