RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 TMEM74Q96NL1 305 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 OSBPL10Q9BXB5 764 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 EHD1Q9H4M9 534 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 XKR8Q9H6D3 395 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 TMEM74BQ9NUR3 256 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 C1orf109Q9NX04 203 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 OR6C2Q9NZP2 312 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 SLAMF8Q9P0V8 285 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 SNX6Q9UNH7 406 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 ICKQ9UPZ9 632 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 MAN2B2Q9Y2E5 1009 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 NEUROG3Q9Y4Z2 214 aa11.21□□□□□ -0.61
VRK3-223ENST00000601341 ANKRD33BA6NCL7 494 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 LMO7DNF2Z398 122 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 FFAR3O14843 346 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 YY2O15391 372 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 GPR42O15529 346 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 PRAMEF4O60810 478 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 MAPK1P28482 360 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 SLC5A2P31639 672 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 HOXD12P35452 270 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 CTSKP43235 329 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 OR4D2P58180 307 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 UBE2IP63279 158 aaKnown RBP11.21□□□□□ -0.62
VRK3-223ENST00000601341 YBX1P67809 324 aaKnown RBP11.21□□□□□ -0.62
VRK3-223ENST00000601341 DOC2AQ14183 400 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 E2F2Q14209 437 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 ANGPT1Q15389 498 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 MAPKAPK3Q16644 382 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 PAGE2BQ5JRK9 111 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 LRIF1Q5T3J3 769 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 PRAMEF9Q5VWM5 478 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 DHRS4L2Q6PKH6 230 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 SCIMPQ6UWF3 145 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 RABEPKQ7Z6M1 372 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 SLC9B2Q86UD5 537 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 AMIGO1Q86WK6 493 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 C17orf64Q86WR6 236 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 RBM12BQ8IXT5 1001 aaKnown RBP11.21□□□□□ -0.62
VRK3-223ENST00000601341 ZNF548Q8NEK5 533 aaPredicted RBP11.21□□□□□ -0.62
VRK3-223ENST00000601341 OR2T12Q8NG77 320 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 SLC37A2Q8TED4 501 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 PATE1Q8WXA2 126 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 PIGKQ92643 395 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 TESCQ96BS2 214 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 WDR34Q96EX3 536 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 ZNF583Q96ND8 569 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 EFCAB11Q9BUY7 163 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 ACAT2Q9BWD1 397 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 DPY30Q9C005 99 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 SRMSQ9H3Y6 488 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 ELOVL6Q9H5J4 265 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 LRTM1Q9HBL6 345 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 USE1Q9NZ43 259 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 TAC3Q9UHF0 121 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 POLR3HQ9Y535 204 aaPredicted RBP11.21□□□□□ -0.62
VRK3-223ENST00000601341 PCDHGA2Q9Y5H1 932 aa11.21□□□□□ -0.62
VRK3-223ENST00000601341 LRP4O75096 1905 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 SPAG17Q6Q759 2223 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 KCNE1BA0A087WTH5 132 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 TRBV5-3A0A0A0MS03 114 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 A0A1W2PPV9 198 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 H3BSA7 217 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 MANBAO00462 879 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 PIAS2O75928 621 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 PGRP06401 933 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 C1GALT1C1LP0DN25 315 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 ARRB1P49407 418 aaPredicted RBP11.2□□□□□ -0.62
VRK3-223ENST00000601341 CLDN8P56748 225 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 NUP107P57740 925 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 CYP4F3Q08477 520 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 LAPTM5Q13571 262 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 SIM2Q14190 667 aaPredicted RBP11.2□□□□□ -0.62
VRK3-223ENST00000601341 PLCL1Q15111 1095 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 IMPG1Q17R60 797 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 DPY19L1Q2PZI1 675 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 CCNYL2Q5T2Q4 361 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 FAM219BQ5XKK7 198 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 FRG2Q64ET8 278 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 GRHL2Q6ISB3 625 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 NXPE4Q6UWF7 544 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 TMPRSS11BQ86T26 416 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 ZNF786Q8N393 782 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 OR4E2Q8NGC2 313 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 TBC1D20Q96BZ9 403 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 PPM1MQ96MI6 270 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 RNF145Q96MT1 663 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 FRG2BQ96QU4 278 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 ELF4Q99607 663 aaPredicted RBP11.2□□□□□ -0.62
VRK3-223ENST00000601341 DOK1Q99704 481 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 NRTNQ99748 197 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 KCNH6Q9H252 994 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 RMND5AQ9H871 391 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 TMEM9Q9P0T7 183 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 DNAJB9Q9UBS3 223 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 ZNF490Q9ULM2 529 aaPredicted RBP11.2□□□□□ -0.62
VRK3-223ENST00000601341 PCDHB11Q9Y5F2 797 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 PCDHGA11Q9Y5H2 935 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 SNX11Q9Y5W9 270 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms