RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
LTBP4-228ENST00000600499 GPN3Q9UHW5 284 aaPredicted RBP13.84□□□□□ -0.19
LTBP4-228ENST00000600499 NAALAD2Q9Y3Q0 740 aa13.84□□□□□ -0.19
LTBP4-228ENST00000600499 MRPS18BQ9Y676 258 aaKnown RBP13.84□□□□□ -0.19
LTBP4-228ENST00000600499 MAU2Q9Y6X3 613 aa13.84□□□□□ -0.19
LTBP4-228ENST00000600499 CCDC88CQ9P219 2028 aa13.84□□□□□ -0.19
LTBP4-228ENST00000600499 DSPP15924 2871 aaKnown RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 SERTM1A2A2V5 107 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 ESRRBO95718 433 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 SERPIND1P05546 499 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 ENO1P06733 434 aaKnown RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 BPGMP07738 259 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 UMODP07911 640 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 ZNF888P0CJ79 500 aaPredicted RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 ALDH3A1P30838 453 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 TSFMP43897 325 aaKnown RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 ASPHQ12797 758 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 CUL3Q13618 768 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 MPP2Q14168 576 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 TOR1AIP1Q5JTV8 583 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 MLIPQ5VWP3 458 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 KHDRBS2Q5VWX1 349 aaKnown RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 FRG2Q64ET8 278 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 CHSY3Q70JA7 882 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 UBE3DQ7Z6J8 389 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 HOMEZQ8IX15 550 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 CCDC63Q8NA47 563 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 STT3BQ8TCJ2 826 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 AGAP11Q8TF27 550 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 COL26A1Q96A83 441 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 CNDP1Q96KN2 507 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 FRG2BQ96QU4 278 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 GATA5Q9BWX5 397 aaPredicted RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 NPLQ9BXD5 320 aaPredicted RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 REXO4Q9GZR2 422 aaKnown RBP13.83□□□□□ -0.2
LTBP4-228ENST00000600499 PRDM7Q9NQW5 492 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 CTSFQ9UBX1 484 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 SCN3AQ9NY46 2000 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 LOC400499M0QZD8 3231 aa13.83□□□□□ -0.2
LTBP4-228ENST00000600499 A0A1W2PQ72 361 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 GOLGA6L10A6NI86 522 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 MAGEB17A8MXT2 336 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 UBFD1O14562 309 aaKnown RBP13.82□□□□□ -0.2
LTBP4-228ENST00000600499 PCDH17O14917 1159 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 BIRC5O15392 142 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 NKX2-8O15522 239 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 NPHS1O60500 1241 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 ZWINTO95229 277 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 BMP10O95393 424 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 ZGLP1P0C6A0 271 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 PTX3P26022 381 aaPredicted RBP13.82□□□□□ -0.2
LTBP4-228ENST00000600499 SERPINB5P36952 375 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 RPS18P62269 152 aaKnown RBP13.82□□□□□ -0.2
LTBP4-228ENST00000600499 PHEXP78562 749 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 OCA2Q04671 838 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 CDC20Q12834 499 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 IL10RAQ13651 578 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 RBBP7Q16576 425 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 DEFB134Q4QY38 66 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 GPRIN3Q6ZVF9 776 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 ZC3H7AQ8IWR0 971 aaKnown RBP13.82□□□□□ -0.2
LTBP4-228ENST00000600499 METTL27Q8N6F8 245 aaPredicted RBP13.82□□□□□ -0.2
LTBP4-228ENST00000600499 ZCCHC10Q8TBK6 192 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 CATSPER2Q96P56 530 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 KCNC2Q96PR1 638 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 OR1F2PQ96R84 312 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 F2RL3Q96RI0 385 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 TBCDQ9BTW9 1192 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 ROGDIQ9GZN7 287 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 CENPHQ9H3R5 247 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 BRF2Q9HAW0 419 aa13.82□□□□□ -0.2
LTBP4-228ENST00000600499 CACNA1BQ00975 2339 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 A0A088AWK7 358 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 SGK494L7N484 410 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 ERI3O43414 337 aaKnown RBP13.81□□□□□ -0.2
LTBP4-228ENST00000600499 OR4F21O95013 312 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 SEMA3DO95025 777 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 IGHEP01854 428 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 ITGB2P05107 769 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 FURINP09958 794 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 PCNAP12004 261 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 HSD3B1P14060 373 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 TSPAN8P19075 237 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 ZNF10P21506 573 aaPredicted RBP13.81□□□□□ -0.2
LTBP4-228ENST00000600499 HSD3B2P26439 372 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 FOLR3P41439 243 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 SERPINB4P48594 390 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 RAB8AP61006 207 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 CXADRP78310 365 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 TGM3Q08188 693 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 COL9A2Q14055 689 aaPredicted RBP13.81□□□□□ -0.2
LTBP4-228ENST00000600499 COL28A1Q2UY09 1125 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 VWA2Q5GFL6 755 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 TRIM40Q6P9F5 258 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 RNF165Q6ZSG1 346 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 GPR155Q7Z3F1 870 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 MYLK4Q86YV6 388 aaPredicted RBP13.81□□□□□ -0.2
LTBP4-228ENST00000600499 CCNYL1Q8N7R7 359 aa13.81□□□□□ -0.2
LTBP4-228ENST00000600499 OR51Q1Q8NH59 317 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms