RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 TOR1AIP1Q5JTV8 583 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 FHL5Q5TD97 284 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 ABHD17BQ5VST6 288 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 ISCA2Q86U28 154 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 RELL1Q8IUW5 271 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 NOA1Q8NC60 698 aaKnown RBP14.38□□□□□ -0.11
TRIM28-203ENST00000593582 IFT81Q8WYA0 676 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 ESAMQ96AP7 390 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 SMIM10Q96HG1 83 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 FAR2Q96K12 515 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 CD244Q9BZW8 370 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 NT5DC2Q9H857 520 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 IGSF5Q9NSI5 407 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 NUDT4Q9NZJ9 180 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 COPG2Q9UBF2 871 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 DMGDHQ9UI17 866 aaKnown RBP14.38□□□□□ -0.11
TRIM28-203ENST00000593582 DOCK10Q96BY6 2186 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 HECTD1Q9ULT8 2610 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 A0A087X1B8 175 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 A0A088AWK7 358 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 LRIT2A6NDA9 550 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 SYCE1LA8MT33 242 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 A8MUI8 341 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 SUPT3HB4E1H0 165 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 PRMT3O60678 531 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 KERAO60938 352 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 DNAJB6O75190 326 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 SUPT3HO75486 399 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 CLEC3AO75596 197 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 RNH1P13489 461 aaKnown RBP14.37□□□□□ -0.11
TRIM28-203ENST00000593582 ZNF10P21506 573 aaPredicted RBP14.37□□□□□ -0.11
TRIM28-203ENST00000593582 GMPRP36959 345 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 KCNC1P48547 511 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 OR4D2P58180 307 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 DLG1Q12959 904 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 MRPL49Q13405 166 aaKnown RBP14.37□□□□□ -0.11
TRIM28-203ENST00000593582 BMPR2Q13873 1038 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 NR6A1Q15406 480 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 SFT2D3Q587I9 215 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 PAGE2BQ5JRK9 111 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 LRRC70Q7Z2Q7 622 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 CATSPER1Q8NEC5 780 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 OR1N1Q8NGS0 311 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 HAS2Q92819 552 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 TSLPQ969D9 159 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 GAL3ST3Q96A11 431 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 PTCD3Q96EY7 689 aaKnown RBP14.37□□□□□ -0.11
TRIM28-203ENST00000593582 PTCHD1Q96NR3 888 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 FMO2Q99518 471 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 LPAR4Q99677 370 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 BARD1Q99728 777 aaKnown RBP14.37□□□□□ -0.11
TRIM28-203ENST00000593582 EFCAB11Q9BUY7 163 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.37□□□□□ -0.112e-6■□□□□ 11.2
TRIM28-203ENST00000593582 ACSS3Q9H6R3 686 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 PLA2G3Q9NZ20 509 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 STMN3Q9NZ72 180 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 NINJ2Q9NZG7 142 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 SCN3AQ9NY46 2000 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 LRRK2Q5S007 2527 aa14.37□□□□□ -0.11
TRIM28-203ENST00000593582 TRAV17A0A0B4J275 112 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 CCDC189A1A4V9 331 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 ERI3O43414 337 aaKnown RBP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 AGFG2O95081 481 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 CBX6O95503 412 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 ACSL3O95573 720 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 C2P06681 752 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 TNFSF10P50591 281 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 BTN3A2P78410 334 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 IRF8Q02556 426 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 ZNF33BQ06732 778 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 SRSF1Q07955 248 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 LAPTM5Q13571 262 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 DOC2AQ14183 400 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 ELOAQ14241 798 aaKnown RBP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 HIST2H2ACQ16777 129 aaPredicted RBP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 EIF2S3LQ2VIR3 472 aaKnown RBP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 HIST2H2AA3Q6FI13 130 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 PAPD4Q6PIY7 484 aaKnown RBP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 QSOX2Q6ZRP7 698 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 KIF18AQ8NI77 898 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 M1APQ8TC57 530 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 NXNL1Q96CM4 212 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 MS4A6EQ96DS6 147 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 WDR34Q96EX3 536 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 MAGEB10Q96LZ2 347 aaPredicted RBP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 ATOH8Q96SQ7 321 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 REXO4Q9GZR2 422 aaKnown RBP14.36□□□□□ -0.11
TRIM28-203ENST00000593582 AICDAQ9GZX7 198 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 RNF32Q9H0A6 362 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 RHBGQ9H310 441 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 PRM3Q9NNZ6 103 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 MMP25Q9NPA2 562 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 SNX15Q9NRS6 342 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 NTNG1Q9Y2I2 539 aa14.36□□□□□ -0.11
TRIM28-203ENST00000593582 A0A096LPK6 155 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 HMX2A2RU54 273 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 ANKUB1A6NFN9 424 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 C4orf51C9J302 202 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 UBXN8O00124 270 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 PRAMEF4O60810 478 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms