RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 ADNP2Q6IQ32 1131 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 TBC1D1Q86TI0 1168 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-226ENST00000590171 ISCA2Q86U28 154 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 KRT78Q8N1N4 520 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 MMGT1Q8N4V1 131 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 SNX31Q8N9S9 440 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 TTLQ8NG68 377 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 MRRFQ96E11 262 aaKnown RBP19.36■□□□□ 0.69
CIRBP-226ENST00000590171 PSMG3-AS1Q96PY0 264 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 EHD1Q9H4M9 534 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 NT5DC2Q9H857 520 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 CLK4Q9HAZ1 481 aaKnown RBP19.36■□□□□ 0.69
CIRBP-226ENST00000590171 IGSF5Q9NSI5 407 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 PTPN13Q12923 2485 aa19.36■□□□□ 0.69
CIRBP-226ENST00000590171 ANKUB1A6NFN9 424 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 A8MUI8 341 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 CLGNO14967 610 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 TBX6O95947 436 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 S100BP04271 92 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 EPORP19235 508 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 CD22P20273 847 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 GSTM2P28161 218 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 OR4D2P58180 307 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 STXBP1P61764 594 aaKnown RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 ZNF33BQ06732 778 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 BMPR2Q13873 1038 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 EXT1Q16394 746 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 PDK4Q16654 411 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 RPUSD3Q6P087 351 aaKnown RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 VN1R5Q7Z5H4 357 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 CA13Q8N1Q1 262 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 NOA1Q8NC60 698 aaKnown RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 STAG3L4Q8TBR4 150 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 M1APQ8TC57 530 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 CCT6BQ92526 530 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 GAL3ST3Q96A11 431 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 WDR34Q96EX3 536 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 MAGEB10Q96LZ2 347 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 ATOH8Q96SQ7 321 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 LPAR4Q99677 370 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 PITHD1Q9GZP4 211 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 RNF32Q9H0A6 362 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 NINJ2Q9NZG7 142 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 NUDT4Q9NZJ9 180 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 DMGDHQ9UI17 866 aaKnown RBP19.35■□□□□ 0.69
CIRBP-226ENST00000590171 LRRK2Q5S007 2527 aa19.35■□□□□ 0.69
CIRBP-226ENST00000590171 TRAV17A0A0B4J275 112 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 A0A0G2JN53 185 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 HMX2A2RU54 273 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 LRIT2A6NDA9 550 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 FAM227AF5H4B4 570 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 E2F3O00716 465 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 CCNT2O60583 730 aaKnown RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 LTA4HP09960 611 aaKnown RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 RNF224P0DH78 156 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 RNH1P13489 461 aaKnown RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 BTN3A2P78410 334 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 BTG2P78543 158 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 IRF9Q00978 393 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 ACTN3Q08043 901 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 DOC2AQ14183 400 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 XKR6Q5GH73 641 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 FCRLBQ6BAA4 426 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 H3F3CQ6NXT2 135 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 QSOX2Q6ZRP7 698 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 CENPLQ8N0S6 344 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 KCTD4Q8WVF5 259 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 FAR1Q8WVX9 515 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 NXNL1Q96CM4 212 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 MS4A6EQ96DS6 147 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 PTCD3Q96EY7 689 aaKnown RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 SEC16BQ96JE7 1060 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 PTCHD1Q96NR3 888 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 CD244Q9BZW8 370 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 RHBGQ9H310 441 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 KCNK13Q9HB14 408 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 NMRAL1Q9HBL8 299 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 MMP25Q9NPA2 562 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 STMN3Q9NZ72 180 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 TEKT2Q9UIF3 430 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 ZNF490Q9ULM2 529 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 COL12A1Q99715 3063 aa19.34■□□□□ 0.69
CIRBP-226ENST00000590171 USP9XQ93008 2570 aaPredicted RBP19.34■□□□□ 0.69
CIRBP-226ENST00000590171 OR5H15A6NDH6 313 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 SUPT3HB4E1H0 165 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 UBXN8O00124 270 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 PSMD12O00232 456 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-226ENST00000590171 ERI3O43414 337 aaKnown RBP19.33■□□□□ 0.68
CIRBP-226ENST00000590171 PRMT3O60678 531 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 KERAO60938 352 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 SUPT3HO75486 399 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 CLEC3AO75596 197 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 MAOAP21397 527 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 SLC26A5P58743 744 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 MROH9Q5TGP6 573 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 FAM180AQ6UWF9 173 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 LRRC70Q7Z2Q7 622 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 ST6GALNAC3Q8NDV1 305 aa19.33■□□□□ 0.68
CIRBP-226ENST00000590171 SSC4DQ8WTU2 575 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms