RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 VPS4BO75351 444 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 SCELO95171 688 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 MED26O95402 600 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 RAP1GDS1P52306 607 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 SNRPNP63162 240 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 SKP1P63208 163 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 GABREP78334 506 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 CAMK2BQ13554 666 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 NR6A1Q15406 480 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 SPIN4Q56A73 249 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 TMEM164Q5U3C3 297 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 PRAMEF17Q5VTA0 474 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 UBE3DQ7Z6J8 389 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 METTL4Q8N3J2 472 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 CHTF18Q8WVB6 975 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 C11orf24Q96F05 449 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 PPP3R2Q96LZ3 170 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 C17orf62Q9BQA9 187 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 ZNF717Q9BY31 904 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 MRPL1Q9BYD6 325 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 TRIM55Q9BYV6 548 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 ROGDIQ9GZN7 287 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 LHX9Q9NQ69 397 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 AHSPQ9NZD4 102 aa16.12■□□□□ 0.17
PRKCSH-203ENST00000586486 A0A088AWK7 358 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 A0A1B0GX78 115 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 GMNCA6NCL1 334 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 C9orf172C9J069 976 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 SAP18O00422 153 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 SDHDO14521 159 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 DSCR3O14972 297 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 SH3BGRLO75368 114 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 NSA2O95478 260 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 PRR35P0CG20 571 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 TROVE2P10155 538 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 ZNF10P21506 573 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 RAB8AP61006 207 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 FOXC1Q12948 553 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 CGB2Q6NT52 195 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 GALNT18Q6P9A2 607 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 FOXR1Q6PIV2 292 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 EPGNQ6UW88 154 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 PROKR1Q8TCW9 393 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 LRFN5Q96NI6 719 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 QRFPRQ96P65 431 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 ANKHQ9HCJ1 492 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 NPHS2Q9NP85 383 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 PRDM7Q9NQW5 492 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 C1orf109Q9NX04 203 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 ADAM29Q9UKF5 820 aa16.11■□□□□ 0.17
PRKCSH-203ENST00000586486 ATP6AP2A0A1C7CYW4 349 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 NVLO15381 856 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 FOXS1O43638 330 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 GALR3O60755 368 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 ATP6AP2O75787 350 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 DXOO77932 396 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 TNFSF15O95150 251 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 IL1RNP18510 177 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 RORAP35398 523 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 BSGP35613 385 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 PLA2G16P53816 162 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 SEC24CP53992 1094 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 AQP5P55064 265 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 ACSM2AQ08AH3 577 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 RTP5Q14D33 572 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 SMU1Q2TAY7 513 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 ATP6AP1LQ52LC2 224 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 SPDYAQ5MJ70 313 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 VWA5B1Q5TIE3 1220 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 ACSM2BQ68CK6 577 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 OR4C11Q6IEV9 310 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 PRMT9Q6P2P2 845 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 TTLL10Q6ZVT0 673 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 COMMD6Q7Z4G1 85 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 NUDT13Q86X67 352 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 ZFAND4Q86XD8 727 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 PDSS2Q86YH6 399 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 TUBGCP3Q96CW5 907 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 APIPQ96GX9 242 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 FCRL1Q96LA6 429 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 SLC46A1Q96NT5 459 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 ULBP3Q9BZM4 244 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 NSRP1Q9H0G5 558 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 CLK4Q9HAZ1 481 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 LRTM1Q9HBL6 345 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 TXLNGQ9NUQ3 528 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 TMED5Q9Y3A6 229 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 PCDHGA7Q9Y5G6 932 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 FER1L5A0AVI2 2057 aa16.1■□□□□ 0.17
PRKCSH-203ENST00000586486 H0YIG0 161 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 KLHL18O94889 574 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 ACPPP15309 386 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 HIST1H1TP22492 207 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 ATP5A1P25705 553 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 SSR2P43308 183 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 MTTPP55157 894 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 KIAA0040Q15053 153 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 AP5B1Q2VPB7 878 aa16.09■□□□□ 0.17
PRKCSH-203ENST00000586486 DEFB134Q4QY38 66 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms