RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MS4A6EQ96DS6 147 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 KCNC2Q96PR1 638 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 SERINC2Q96SA4 455 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 YIPF2Q9BWQ6 316 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ERVK-6Q9BXR3 956 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 REXO4Q9GZR2 422 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 SOX17Q9H6I2 414 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 IPPKQ9H8X2 491 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 COPS7BQ9H9Q2 264 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 C5AR2Q9P296 337 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 PCTPQ9UKL6 214 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 MRPS33Q9Y291 106 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ASB1Q9Y576 335 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 HS3ST3B1Q9Y662 390 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ARGFXA6NJG6 315 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 A8MT66 165 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 IDSB3KWA1 339 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 SCELO95171 688 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 MLYCDO95822 493 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 ALPPP05187 535 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 SBK3P0C264 359 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF888P0CJ79 500 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 RNH1P13489 461 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 CD22P20273 847 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 XCR1P46094 333 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 CCNG1P51959 295 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 MTTPP55157 894 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF33BQ06732 778 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 HYAL2Q12891 473 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 LACTB2Q53H82 288 aaPredicted RBP13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 VWA2Q5GFL6 755 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 TOR1AIP1Q5JTV8 583 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 CEP85LQ5SZL2 805 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 TMEM205Q6UW68 189 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 QSOX2Q6ZRP7 698 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 RIPOR1Q6ZS17 1223 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 IQCKQ8N0W5 287 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 OR7G3Q8NG95 312 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 PPP4R1Q8TF05 950 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF473Q8WTR7 871 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 CCT6BQ92526 530 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 TM9SF4Q92544 642 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 TBC1D20Q96BZ9 403 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 PKNOX2Q96KN3 472 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 TBCDQ9BTW9 1192 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 SLC25A23Q9BV35 468 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 MS4A8Q9BY19 250 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 IQCGQ9H095 443 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 MLXIPLQ9NP71 852 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 TMEM216Q9P0N5 145 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 ANAPC2Q9UJX6 822 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 MRPS2Q9Y399 296 aaKnown RBP13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF451Q9Y4E5 1061 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 MMACHCQ9Y4U1 282 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 SPACA6W5XKT8 324 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 COL6A6A6NMZ7 2263 aa13.06□□□□□ -0.32
PRKCSH-202ENST00000585540 SGK494L7N484 410 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 FOXE1O00358 373 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 CDK2AP1O14519 115 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 SOCS6O14544 535 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 COPEO14579 308 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 ERI3O43414 337 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 B3GALT2O43825 422 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 PRAMEF4O60810 478 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 ALOX12BO75342 701 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 RDH16O75452 317 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 SEMA3DO95025 777 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 FHP07954 510 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 FAM87AP0C7U9 286 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 C8orf89P0DMQ9 161 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 IMPDH1P20839 514 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 PRKAA2P54646 552 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 SLC18A2Q05940 514 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 C19orf57Q0VDD7 668 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 ASPHQ12797 758 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 MYBPC3Q14896 1274 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 DEFB134Q4QY38 66 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 VWA5B1Q5TIE3 1220 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 PRAMEF9Q5VWM5 478 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 TRABD2AQ86V40 505 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 TMEM151AQ8N4L1 468 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF483Q8TF39 744 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 L3HYPDHQ96EM0 354 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 SMAD5Q99717 465 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 TUBB6Q9BUF5 446 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 LYRM4Q9HD34 91 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 GPR83Q9NYM4 423 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 TRPS1Q9UHF7 1281 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 EMCNQ9ULC0 261 aa13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF490Q9ULM2 529 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 DSPP15924 2871 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-202ENST00000585540 LRRC14BA6NHZ5 514 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 MAGEB17A8MXT2 336 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 CLDN4O14493 209 aa13.04□□□□□ -0.32
PRKCSH-202ENST00000585540 SIX3O95343 332 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms