RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 EXOC3L2Q2M3D2 409 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 COLEC12Q5KU26 742 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HENMT1Q5T8I9 393 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RAVER1Q8IY67 606 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LGI4Q8N135 537 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TRAM1L1Q8N609 369 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OR4K1Q8NGD4 311 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OR52N2Q8NGI0 321 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OR2A12Q8NGT7 310 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ERLEC1Q96DZ1 483 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PKP4Q99569 1192 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CDADC1Q9BWV3 514 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 C6orf62Q9GZU0 229 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 REEP4Q9H6H4 257 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GPC6Q9Y625 555 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PLXNA2O75051 1894 aa13.63□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 WASH3PC4AMC7 463 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TEX28O15482 410 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TLL1O43897 1013 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DBTP11182 482 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF8P17098 575 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 BDKRB1P46663 353 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CASP9P55211 416 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FCHO2Q0JRZ9 810 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SCARB2Q14108 478 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 EIF4HQ15056 248 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GCNT6Q5T4J0 391 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 STEAP3Q658P3 488 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLCO4C1Q6ZQN7 724 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TMC8Q8IU68 726 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LILRA3Q8N6C8 439 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NEIL2Q969S2 332 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC35A5Q9BS91 424 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZSCAN5AQ9BUG6 496 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RIOK2Q9BVS4 552 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TMEM38AQ9H6F2 299 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CCDC59Q9P031 241 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MAFFQ9ULX9 164 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 KCNE2Q9Y6J6 123 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MYOFQ9NZM1 2061 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC5A10A0PJK1 596 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PTHP01270 115 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NAT2P11245 290 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ITGA2P17301 1181 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RGS6P49758 472 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CTSCP53634 463 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF763Q0D2J5 394 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ST3GAL4Q11206 333 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IRF3Q14653 427 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TPRG1LQ5T0D9 272 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 C10orf62Q5T681 223 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MED27Q6P2C8 311 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NLRP8Q86W28 1048 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 STX19Q8N4C7 294 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RASGEF1AQ8N9B8 481 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 KBTBD8Q8NFY9 601 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CD99L2Q8TCZ2 262 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SAMD11Q96NU1 681 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TCF25Q9BQ70 676 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 KLHL25Q9H0H3 589 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SMG9Q9H0W8 520 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 C1GALT1Q9NS00 363 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PCDHGA3Q9Y5H0 932 aa13.62□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PCM1Q15154 2024 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TBX1O43435 398 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PQBP1O60828 265 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GJA1P17302 382 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OLR1P78380 273 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF45Q02386 682 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRKCDQ05655 676 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ARMCX4Q5H9R4 360 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OTOP2Q7RTS6 562 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NFKBIDQ8NI38 313 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 UTP15Q8TED0 518 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 BTN2A2Q8WVV5 523 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC35B4Q969S0 331 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CCM2Q9BSQ5 444 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IRF2BPLQ9H1B7 796 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OR51E2Q9H255 320 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 EHD1Q9H4M9 534 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRM3Q9NNZ6 103 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NFKBIL1Q9UBC1 381 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 A0A1W2PRU2 124 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HTR3EA5X5Y0 456 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ATG13O75143 517 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 C6orf47O95873 294 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LIMS1P48059 325 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRIM2P49643 509 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRLHRP49683 370 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HMGA2P52926 109 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PNLIPRP1P54315 467 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 EEF1A2Q05639 463 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SELENBP1Q13228 472 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PNCKQ6P2M8 343 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TMPRSS11BQ86T26 416 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DDX53Q86TM3 631 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TMEM25Q86YD3 366 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms