RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FAM157CP0CG43 387 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 PKMP14618 531 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 PAX1P15863 534 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 ZNF16P17020 682 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 TPH1P17752 444 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 MSNP26038 577 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 PSMB4P28070 264 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 TIMP3P35625 211 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 NR2C2P49116 596 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 BTG2P78543 158 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 PRDX1Q06830 199 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 SEMA3AQ14563 771 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 ZNF750Q32MQ0 723 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 CHRFAM7AQ494W8 412 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 ACSF3Q4G176 576 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 XKR6Q5GH73 641 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 ICE2Q659A1 982 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 ABHD13Q7L211 337 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 MAATS1Q7Z4T9 603 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 KCT2Q8NC54 265 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 QKIQ96PU8 341 aaKnown RBP eCLIP7.09□□□□□ -1.272e-13■■■■■ 29.8
SMARCE1-217ENST00000580654 OR1F2PQ96R84 312 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 CARD6Q9BX69 1037 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 LIN28AQ9H9Z2 209 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 UBTD1Q9HAC8 227 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 IL1RL2Q9HB29 575 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 YAE1D1Q9NRH1 226 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 TUBA8Q9NY65 449 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 SPATA7Q9P0W8 599 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 TAC3Q9UHF0 121 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 NENFQ9UMX5 172 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 PCDHGB3Q9Y5G1 929 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 PCDHA3Q9Y5H8 950 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 USF3Q68DE3 2245 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 IGKV3D-11A0A0A0MRZ8 115 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 TRGV5A0A0B4J1U4 118 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 TRBV11-1A0A0K0K1C0 115 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 A8MUA0 341 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 CST8O60676 142 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 HCN1O60741 890 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 APOA4P06727 396 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 FHP07954 510 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 FPR1P21462 350 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 CNR1P21554 472 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 LOXP28300 417 aaPredicted RBP7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 RBL1P28749 1068 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 CDKN2BP42772 138 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 DNASE1L1P49184 302 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 SSR4P51571 173 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 GPR143P51810 404 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 SLC10A1Q14973 349 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 TTC23LQ6PF05 361 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 IL20RBQ6UXL0 311 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 BZW1Q7L1Q6 419 aaKnown RBP7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 KLHDC8BQ8IXV7 354 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 FBXW8Q8N3Y1 598 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 PPFIBP2Q8ND30 876 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 ZCCHC10Q8TBK6 192 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 MCOLN3Q8TDD5 553 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 STYXQ8WUJ0 223 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 SMPDL3AQ92484 453 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 ISL2Q96A47 359 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 HAUS1Q96CS2 278 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 TM4SF19Q96DZ7 209 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 TBL1YQ9BQ87 522 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 FAM173AQ9BQD7 235 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 PIGQQ9BRB3 760 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 LDAHQ9H6V9 325 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 GALNT8Q9NY28 637 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 CTTNBP2NLQ9P2B4 639 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 FBXW2Q9UKT8 454 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 ERVK-11Q9UQG0 969 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 NAALAD2Q9Y3Q0 740 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 TESMINQ9Y4I5 508 aa7.08□□□□□ -1.28
SMARCE1-217ENST00000580654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.08□□□□□ -1.281e-10■■■■□ 23.8
SMARCE1-217ENST00000580654 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 TCRBV16S1A1N1A0A5B0 115 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 MROH6A6NGR9 719 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 A8MVJ9 347 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 EEF1E1-BLOC1S5C9J1V9 151 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 H7BY64 318 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 EEF1E1O43324 174 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF354AO60765 605 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 B4GALT2O60909 372 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 OR2J2O76002 312 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 B3GALT4O96024 378 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 RFPL3SP0C7P2 107 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 MAOAP21397 527 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 IL10P22301 178 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 RPA3P35244 121 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 SOX3P41225 446 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 CLCN2P51788 898 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 OLR1P78380 273 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 HYAL2Q12891 473 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 POU6F1Q14863 301 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 C20orf204Q6ZNR8 217 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 GK5Q6ZS86 529 aa7.07□□□□□ -1.28
SMARCE1-217ENST00000580654 ZNF534Q76KX8 674 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms