RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PPP1CAP62136 330 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 CBX1P83916 185 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 BTKQ06187 659 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 CSTF3Q12996 717 aaKnown RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 TRA2AQ13595 282 aaKnown RBP eCLIP7.65□□□□□ -1.18
COPS3-215ENST00000578317 ABRAXAS2Q15018 415 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 SMU1Q2TAY7 513 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 AMZ1Q400G9 498 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 XKR7Q5GH72 579 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ZC3H12BQ5HYM0 836 aaKnown RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 IRGCQ6NXR0 463 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ZNF574Q6ZN55 896 aaPredicted RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 LARP4Q71RC2 724 aaKnown RBP eCLIP7.65□□□□□ -1.18
COPS3-215ENST00000578317 RNF44Q7L0R7 432 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 MAVSQ7Z434 540 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 SPATA21Q7Z572 469 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ARHGAP22Q7Z5H3 698 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 MYLK4Q86YV6 388 aaPredicted RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 FAM20CQ8IXL6 584 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 DMRTC2Q8IXT2 367 aaPredicted RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 DNAJC22Q8N4W6 341 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ANKS4BQ8N8V4 417 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ANKRD53Q8N9V6 530 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 MFSD9Q8NBP5 474 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ZNF740Q8NDX6 193 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 TRPV3Q8NET8 790 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 HUS1BQ8NHY5 278 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 AGR3Q8TD06 166 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ACTRT2Q8TDY3 377 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ZNF473Q8WTR7 871 aaKnown RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 SELENOMQ8WWX9 145 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 CCT6BQ92526 530 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 TM4SF19Q96DZ7 209 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 C19orf60Q96EN9 201 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 SLC41A2Q96JW4 573 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ZNF285Q96NJ3 590 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 TGM7Q96PF1 710 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 MAP3K3Q99759 626 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 ELAC2Q9BQ52 826 aaKnown RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 CCDC28BQ9BUN5 200 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 NMRK1Q9NWW6 199 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 MARCOQ9UEW3 520 aaPredicted RBP7.65□□□□□ -1.18
COPS3-215ENST00000578317 BTRCQ9Y297 605 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 HIF3AQ9Y2N7 669 aa7.65□□□□□ -1.18
COPS3-215ENST00000578317 GVINP1Q7Z2Y8 2422 aa7.65□□□□□ -1.19
COPS3-215ENST00000578317 IGHV5-51A0A0C4DH38 117 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 ANKDD1BA6NHY2 528 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 SLC9B1P1A6NJY1 282 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 FFAR3O14843 346 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 PIP5K1BO14986 540 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 GPR42O15529 346 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 RGS14O43566 566 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 OR1F1O43749 312 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 CTSVO60911 334 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 ADAM11O75078 769 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 TBX6O95947 436 aaPredicted RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 PDYNP01213 254 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 RPLP0P05388 317 aaKnown RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 SERPINA6P08185 405 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 PRR35P0CG20 571 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 ST6GAL1P15907 406 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 CSRP1P21291 193 aaKnown RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 CSF2RBP32927 897 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 GFERP55789 205 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 IRX1P78414 480 aaPredicted RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 HSD11B2P80365 405 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 INSM1Q01101 510 aaPredicted RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 ID3Q02535 119 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 ZFP36L1Q07352 338 aaKnown RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 CUL3Q13618 768 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 RBBP5Q15291 538 aaKnown RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 ZIC1Q15915 447 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 DEPDC1Q5TB30 811 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 GKAP1Q5VSY0 366 aaPredicted RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 CACHD1Q5VU97 1274 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 ADCK2Q7Z695 626 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 TRIM73Q86UV7 250 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 D2HGDHQ8N465 521 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 CEP70Q8NHQ1 597 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 RFWD2Q8NHY2 731 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 BCAS4Q8TDM0 211 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 CREB3L4Q8TEY5 395 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 C11orf24Q96F05 449 aaPredicted RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 PPM1MQ96MI6 270 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 ZFYVE21Q9BQ24 234 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 NUF2Q9BZD4 464 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 SPNS1Q9H2V7 528 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 ZNF768Q9H5H4 540 aaKnown RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 PDE7BQ9NP56 450 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 FARSBQ9NSD9 589 aaKnown RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 RIC8BQ9NVN3 520 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 SIRT5Q9NXA8 310 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 VPS29Q9UBQ0 182 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 PCDHB10Q9UN67 800 aa7.64□□□□□ -1.19
COPS3-215ENST00000578317 GOLGA4Q13439 2230 aaKnown RBP7.64□□□□□ -1.19
COPS3-215ENST00000578317 A0A0G2JND7 137 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 FEZF1A0PJY2 475 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 LRIT2A6NDA9 550 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 MAGEB17A8MXT2 336 aa7.63□□□□□ -1.19
COPS3-215ENST00000578317 SDHDO14521 159 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms