RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 MED19A0JLT2 244 aaPredicted RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 H0YIG0 161 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 MEN1O00255 615 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 IL1RNP18510 177 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 AGXTP21549 392 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 ZNF385CQ66K41 422 aaPredicted RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 ABHD17CQ6PCB6 329 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 GALNT6Q8NCL4 622 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 RGMAQ96B86 450 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 C17orf62Q9BQA9 187 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 ACPTQ9BZG2 426 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 COPS7BQ9H9Q2 264 aaPredicted RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 VPS29Q9UBQ0 182 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 DKK4Q9UBT3 224 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 FOXS1O43638 330 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 GALR3O60755 368 aaPredicted RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 ETHE1O95571 254 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 CCNYL3P0C7X3 344 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 PIM1P11309 404 aaPredicted RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 MDH1P40925 334 aaKnown RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 HK2P52789 917 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 PLA2G16P53816 162 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 RAB8AP61006 207 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 DCDP81605 110 aaKnown RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 IMPG1Q17R60 797 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 DEFB134Q4QY38 66 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 C1orf189Q5VU69 101 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 FAM219BQ5XKK7 198 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 CRLF3Q8IUI8 442 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 NLGN4XQ8N0W4 816 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 NLGN4YQ8NFZ3 816 aaPredicted RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 CLK4Q9HAZ1 481 aaKnown RBP16.22■□□□□ 0.19
NUP88-210ENST00000574867 AHSPQ9NZD4 102 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 NAALAD2Q9Y3Q0 740 aa16.22■□□□□ 0.19
NUP88-210ENST00000574867 A0A0A6YYC8 382 aaPredicted RBP16.21■□□□□ 0.19
NUP88-210ENST00000574867 C4orf51C9J302 202 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 SLCO1B7G3V0H7 640 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 I3L1I5 382 aaPredicted RBP16.21■□□□□ 0.19
NUP88-210ENST00000574867 SLC28A1O00337 649 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 KLHL18O94889 574 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 DSG2Q14126 1118 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 ZNF517Q6ZMY9 492 aaPredicted RBP16.21■□□□□ 0.19
NUP88-210ENST00000574867 DDIASQ8IXT1 998 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 OR9A4Q8NGU2 314 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 GATA6Q92908 595 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 MMABQ96EY8 250 aaPredicted RBP16.21■□□□□ 0.19
NUP88-210ENST00000574867 CCDC134Q9H6E4 229 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 ZNF304Q9HCX3 659 aa16.21■□□□□ 0.19
NUP88-210ENST00000574867 FER1L5A0AVI2 2057 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PLPP1O14494 284 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PIP5K1BO14986 540 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 RGS14O43566 566 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 RAD1O60671 282 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SH3BGRLO75368 114 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SKAP2O75563 359 aaPredicted RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 RSL1D1O76021 490 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 SCELO95171 688 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 ONECUT2O95948 504 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 LIPCP11150 499 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SSR2P43308 183 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PCBP4P57723 403 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 GUCY1A3Q02108 690 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 AP5B1Q2VPB7 878 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 NKAIN1Q4KMZ8 207 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PRSS41Q7RTY9 318 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 TIPARPQ7Z3E1 657 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 NUDT13Q86X67 352 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 ZFAND4Q86XD8 727 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 DTX1Q86Y01 620 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PDSS2Q86YH6 399 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PIWIL2Q8TC59 973 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 RNF31Q96EP0 1072 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SERINC2Q96SA4 455 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 TUBB1Q9H4B7 451 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 LHX9Q9NQ69 397 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 VTI1BQ9UEU0 232 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PADI1Q9ULC6 663 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 NPIPB8E9PQR5 432 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SAP18O00422 153 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 FBLP22087 321 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 PRPH2P23942 346 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 MTTPP55157 894 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SNRPNP63162 240 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 BTN3A2P78410 334 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 HMGCS1Q01581 520 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SPIN4Q56A73 249 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 XKR7Q5GH72 579 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 ARHGAP40Q5TG30 622 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SCIMPQ6UWF3 145 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 PAGE2Q7Z2X7 111 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 UBE3DQ7Z6J8 389 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 METTL27Q8N6F8 245 aaPredicted RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 MR1Q95460 341 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 FKBP10Q96AY3 582 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 C19orf60Q96EN9 201 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 METTL2AQ96IZ6 378 aaKnown RBP16.2■□□□□ 0.18
NUP88-210ENST00000574867 QRFPRQ96P65 431 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 FAM117AQ9C073 453 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 SLCO1B3Q9NPD5 702 aa16.2■□□□□ 0.18
NUP88-210ENST00000574867 FAM53CQ9NYF3 392 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms