RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 TM4SF19Q96DZ7 209 aa20.43■□□□□ 0.86
UBFD1-210ENST00000571064 PTCD3Q96EY7 689 aaKnown RBP20.43■□□□□ 0.86
UBFD1-210ENST00000571064 PKNOX2Q96KN3 472 aa20.43■□□□□ 0.86
UBFD1-210ENST00000571064 MACROD1Q9BQ69 325 aa20.43■□□□□ 0.86
UBFD1-210ENST00000571064 FANCEQ9HB96 536 aa20.43■□□□□ 0.86
UBFD1-210ENST00000571064 SERTAD3Q9UJW9 196 aa20.43■□□□□ 0.86
UBFD1-210ENST00000571064 ZNF225Q9UK10 706 aa20.43■□□□□ 0.86
UBFD1-210ENST00000571064 RNF11Q9Y3C5 154 aa20.43■□□□□ 0.86
UBFD1-210ENST00000571064 SRPX2O60687 465 aaPredicted RBP20.42■□□□□ 0.86
UBFD1-210ENST00000571064 DPM1O60762 260 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 TRIM13O60858 407 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 H2AFYO75367 372 aaKnown RBP20.42■□□□□ 0.86
UBFD1-210ENST00000571064 OR2B3O76000 313 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 MED26O95402 600 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 GRK3P35626 688 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 SLC18A1P54219 525 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 RPS15P62841 145 aaKnown RBP20.42■□□□□ 0.86
UBFD1-210ENST00000571064 SNRPNP63162 240 aaKnown RBP20.42■□□□□ 0.86
UBFD1-210ENST00000571064 RBMXL3Q8N7X1 1067 aaKnown RBP20.42■□□□□ 0.86
UBFD1-210ENST00000571064 FDCSPQ8NFU4 85 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 THAP11Q96EK4 314 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 NTMT1Q9BV86 223 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 NT5DC2Q9H857 520 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 SLC5A6Q9Y289 635 aa20.42■□□□□ 0.86
UBFD1-210ENST00000571064 HMGB1P1B2RPK0 211 aaPredicted RBP20.41■□□□□ 0.86
UBFD1-210ENST00000571064 UBFD1O14562 309 aaKnown RBP20.41■□□□□ 0.86
UBFD1-210ENST00000571064 CEACAM4O75871 244 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 CBX6O95503 412 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 EIF2S1P05198 315 aaKnown RBP20.41■□□□□ 0.86
UBFD1-210ENST00000571064 RIPPLY3P57055 190 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 RBBP5Q15291 538 aaKnown RBP20.41■□□□□ 0.86
UBFD1-210ENST00000571064 RBBP7Q16576 425 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 HKDC1Q2TB90 917 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 PRTGQ2VWP7 1150 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 CES4AQ5XG92 561 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 GRHL2Q6ISB3 625 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 TMIGD1Q6UXZ0 262 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 VN1R5Q7Z5H4 357 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.41■□□□□ 0.86
UBFD1-210ENST00000571064 ARHGEF39Q8N4T4 335 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 ZNF655Q8N720 491 aaPredicted RBP20.41■□□□□ 0.86
UBFD1-210ENST00000571064 L3MBTL4Q8NA19 623 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 SLC38A9Q8NBW4 561 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 OR4F6Q8NGB9 312 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 OR6Y1Q8NGX8 325 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 PPP4R1Q8TF05 950 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 N4BP2L2Q92802 583 aaPredicted RBP20.41■□□□□ 0.86
UBFD1-210ENST00000571064 C5orf34Q96MH7 638 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 EFCAB11Q9BUY7 163 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 NUDT9Q9BW91 350 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 ACTR8Q9H981 624 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 PCDHGB7Q9Y5F8 929 aa20.41■□□□□ 0.86
UBFD1-210ENST00000571064 WDR91A4D1P6 747 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 FITM1A5D6W6 292 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 DYNC1I1O14576 645 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 ZNF749O43361 778 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 UGDHO60701 494 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 SCRG1O75711 98 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 TBX6O95947 436 aaPredicted RBP20.4■□□□□ 0.86
UBFD1-210ENST00000571064 CXCR2P25025 360 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 CCNG1P51959 295 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 LAPTM5Q13571 262 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 TCTE1Q5JU00 501 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 LIPJQ5W064 366 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 LETMD1Q6P1Q0 360 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 CYB5D1Q6P9G0 228 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 ZCCHC23Q6ZST2 131 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 FRMD7Q6ZUT3 714 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 ASPGQ86U10 573 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 CSNK1A1LQ8N752 337 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 GOLGA6L1Q8N7Z2 621 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 CREB3L4Q8TEY5 395 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 ATP6V1E2Q96A05 226 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 PNPLA2Q96AD5 504 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 SNRNP40Q96DI7 357 aaKnown RBP20.4■□□□□ 0.86
UBFD1-210ENST00000571064 ACBD3Q9H3P7 528 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 ZFP69BQ9UJL9 534 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 RUVBL1Q9Y265 456 aaKnown RBP20.4■□□□□ 0.86
UBFD1-210ENST00000571064 FARSAQ9Y285 508 aaKnown RBP20.4■□□□□ 0.86
UBFD1-210ENST00000571064 AP1M2Q9Y6Q5 423 aa20.4■□□□□ 0.86
UBFD1-210ENST00000571064 FBN2P35556 2912 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 A6NL46 340 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 ZSCAN9O15535 394 aaPredicted RBP20.39■□□□□ 0.85
UBFD1-210ENST00000571064 ATP8B1O43520 1251 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 CLDN9O95484 217 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 ARRB2P32121 409 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 HPDP32754 393 aaPredicted RBP20.39■□□□□ 0.85
UBFD1-210ENST00000571064 AHRP35869 848 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 LCP2Q13094 533 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 PAGE2BQ5JRK9 111 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 TLDC1Q6P9B6 456 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 TMEM126BQ8IUX1 230 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 NUDCD3Q8IVD9 361 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 LAS2Q8IYD9 372 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 GPR135Q8IZ08 494 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 KRT78Q8N1N4 520 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 MGARPQ8TDB4 240 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 RERGQ96A58 199 aaPredicted RBP20.39■□□□□ 0.85
UBFD1-210ENST00000571064 ZNF382Q96SR6 550 aa20.39■□□□□ 0.85
UBFD1-210ENST00000571064 PITHD1Q9GZP4 211 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms