RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 SERPINA6P08185 405 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 STSP08842 583 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 CCDC166P0CW27 439 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SSTR1P30872 391 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 CD96P40200 585 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 GDF5P43026 501 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 TDGF1P3P51864 188 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 ATP6V0D1P61421 351 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 BTN3A2P78410 334 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 MRPS25P82663 173 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 PMP22Q01453 160 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 ALDH6A1Q02252 535 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 TUBA3CQ13748 450 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 RCN2Q14257 317 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SLBPQ14493 270 aaKnown RBP eCLIP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 NAA30Q147X3 362 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 TGFBIQ15582 683 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 OR1C1Q15619 314 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 ZRSR2Q15696 482 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 MAPKAPK3Q16644 382 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 HIST2H2ACQ16777 129 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 PPP1R3AQ16821 1122 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.39□□□□□ -1.073e-6■□□□□ 10.3
NPLOC4-204ENST00000570324 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 HIST2H2AA3Q6FI13 130 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SPINK14Q6IE38 97 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 H3F3CQ6NXT2 135 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 MTFR2Q6P444 385 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 TUBA3EQ6PEY2 450 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 TMIGD1Q6UXZ0 262 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 QSOX2Q6ZRP7 698 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 C3orf62Q6ZUJ4 267 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 RAPH1Q70E73 1250 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 CCDC25Q86WR0 208 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 GPSM1Q86YR5 675 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 CEP97Q8IW35 865 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SPATA6LQ8N4H0 392 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 AMER2Q8N7J2 671 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SNX31Q8N9S9 440 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 ANKRD53Q8N9V6 530 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 ANKRD49Q8WVL7 239 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 EXT2Q93063 718 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 TMEM125Q96AQ2 219 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 CPNE1Q99829 537 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 WDR83Q9BRX9 315 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 DEFB126Q9BYW3 111 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SLC6A16Q9GZN6 736 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 DERL2Q9GZP9 239 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 RAB17Q9H0T7 212 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 KLHL31Q9H511 634 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 RUBCNLQ9H714 662 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 COPS7BQ9H9Q2 264 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 CAB39LQ9H9S4 337 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 PRDM9Q9NQV7 894 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 DNAJC11Q9NVH1 559 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 CD274Q9NZQ7 290 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 LRFN1Q9P244 771 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 COPG2Q9UBF2 871 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 SH3BGRL2Q9UJC5 107 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 PYCARDQ9ULZ3 195 aa8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 MRPS33Q9Y291 106 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 MTO1Q9Y2Z2 717 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-204ENST00000570324 A0A0G2JN53 185 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 PRSS44E7EML9 344 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 KIF2AO00139 706 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 CCL21O00585 134 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 FCHO1O14526 889 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 PHGDHO43175 533 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 CTIFO43310 598 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 ERI3O43414 337 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 B3GALT2O43825 422 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 DNAJB6O75190 326 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 PIAS1O75925 651 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 ESRRAP11474 423 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 MAOAP21397 527 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 GSTM2P28161 218 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 DCTP40126 519 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 GP5P40197 560 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 CYB561P49447 251 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 ST13P50502 369 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 PLTPP55058 493 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 BTG2P78543 158 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 CAV1Q03135 178 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SRSF11Q05519 484 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 TGM3Q08188 693 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SLC13A2Q13183 592 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 C18orf21Q32NC0 220 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 XKR6Q5GH73 641 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 PAGE2BQ5JRK9 111 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 ZNF324BQ6AW86 544 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SULT1C3Q6IMI6 304 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SLC25A25Q6KCM7 469 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 TRIM40Q6P9F5 258 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SLC34A3Q8N130 599 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 LGI4Q8N135 537 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 CA13Q8N1Q1 262 aa8.38□□□□□ -1.07
NPLOC4-204ENST00000570324 SPATA4Q8NEY3 305 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms