RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 TRAF3Q13114 568 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 ATP1A4Q13733 1029 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 ZNF678Q5SXM1 525 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 CPZQ66K79 652 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 NIPAL1Q6NVV3 410 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 RPS27LQ71UM5 84 aaKnown RBP9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 MYLK4Q86YV6 388 aaPredicted RBP9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 SLC22A9Q8IVM8 553 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 APLFQ8IW19 511 aaPredicted RBP9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 PRSS58Q8IYP2 241 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 IQCKQ8N0W5 287 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 L3MBTL4Q8NA19 623 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 LSM14AQ8ND56 463 aaKnown RBP9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 OR52B6Q8NGF0 335 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 OR5T3Q8NGG3 340 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 ZNF483Q8TF39 744 aaPredicted RBP9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 ZNF473Q8WTR7 871 aaKnown RBP9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 CCT6BQ92526 530 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 GAL3ST3Q96A11 431 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 NACC2Q96BF6 587 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 MS4A6EQ96DS6 147 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 IP6K3Q96PC2 410 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 TMEM237Q96Q45 408 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 ARHGAP9Q9BRR9 750 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 NTMT1Q9BV86 223 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 MS4A8Q9BY19 250 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 RRAGDQ9NQL2 400 aaPredicted RBP9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 SEMA3GQ9NS98 782 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 C3orf18Q9UK00 162 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 GRID1Q9ULK0 1009 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 RNF11Q9Y3C5 154 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 TSC22D4Q9Y3Q8 395 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 HS3ST3B1Q9Y662 390 aa9.07□□□□□ -0.96
HCCAT5-201ENST00000569990 A0A0G2JN53 185 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 A0A1B0GTL3 188 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CCDC151A5D8V7 595 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ARGFXA6NJG6 315 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 IDSB3KWA1 339 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 G3V2L1 256 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 H0YIV9 168 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 PPP6CO00743 305 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 SOCS6O14544 535 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ERI3O43414 337 aaKnown RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 DNAJB6O75190 326 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 JRKO75564 520 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CLDN9O95484 217 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 IGHEP01854 428 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 PCNAP12004 261 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 IMPDH1P20839 514 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 SERPINB1P30740 379 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 PIK3CBP42338 1070 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 XCR1P46094 333 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 EFNA3P52797 238 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 EMP2P54851 167 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CDH13P55290 713 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CLCQ05315 142 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 LY6DQ14210 128 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CPSF6Q16630 551 aaKnown RBP eCLIP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 KRT71Q3SY84 523 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CCDC153Q494R4 210 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 GGTA1PQ4G0N0 100 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 UNC50Q53HI1 259 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 SOWAHCQ53LP3 525 aaPredicted RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 TRIM40Q6P9F5 258 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 KIRREL2Q6UWL6 708 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ZYG11AQ6WRX3 759 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 MED25Q71SY5 747 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 SRRM1Q8IYB3 904 aaKnown RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 EXD3Q8N9H8 876 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 TMEM102Q8N9M5 508 aaPredicted RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 BANPQ8N9N5 519 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 OR2L5Q8NG80 312 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 OR4F6Q8NGB9 312 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 HUS1BQ8NHY5 278 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 RDH11Q8TC12 318 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ATP6V1E2Q96A05 226 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CCDC126Q96EE4 140 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 L3HYPDHQ96EM0 354 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 PEX11GQ96HA9 241 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 APOPT1Q96IL0 206 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 QRFPRQ96P65 431 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CDK15Q96Q40 435 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 F2RL3Q96RI0 385 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 TRIM55Q9BYV6 548 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 REXO4Q9GZR2 422 aaKnown RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ING2Q9H160 280 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ADNPQ9H2P0 1102 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 C12orf65Q9H3J6 166 aaKnown RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 CLK4Q9HAZ1 481 aaKnown RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 SEMA4BQ9NPR2 832 aaPredicted RBP9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 DMRT3Q9NQL9 472 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ACSS2Q9NR19 701 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 P4HTMQ9NXG6 502 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 ADGRE2Q9UHX3 823 aa9.06□□□□□ -0.96
HCCAT5-201ENST00000569990 AGPSO00116 658 aa9.05□□□□□ -0.96
HCCAT5-201ENST00000569990 PEX12O00623 359 aa9.05□□□□□ -0.96
HCCAT5-201ENST00000569990 CHST10O43529 356 aa9.05□□□□□ -0.96
HCCAT5-201ENST00000569990 ERLIN1O75477 346 aa9.05□□□□□ -0.96
HCCAT5-201ENST00000569990 DNAJB5O75953 348 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms