RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GPC4O75487 556 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 STSP08842 583 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RARAP10276 462 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 COX5BP10606 129 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 GEMP55040 296 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 DHX9Q08211 1270 aaKnown RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 VEZF1Q14119 521 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 IRF3Q14653 427 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 AGERQ15109 404 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PXDC1Q5TGL8 231 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PRAMEF13Q5VWM6 474 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 KCTD20Q7Z5Y7 419 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 HORMAD1Q86X24 394 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 C12orf29Q8N999 325 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 FAM181AQ8N9Y4 354 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 UBA3Q8TBC4 463 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 LINC01599Q8WXQ3 324 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 FGF11Q92914 225 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 PTERQ96BW5 349 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 C1GALT1C1Q96EU7 318 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 ZNF578Q96N58 590 aaPredicted RBP6.41□□□□□ -1.38
SMG1-217ENST00000569764 PWWP2AQ96N64 755 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 OSBPL8Q9BZF1 889 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 TRIM31Q9BZY9 425 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 HIF1ANQ9NWT6 349 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 STOML1Q9UBI4 398 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CTSFQ9UBX1 484 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 CRLS1Q9UJA2 301 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 ERGIC3Q9Y282 383 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 RALGAPA2Q2PPJ7 1873 aa6.41□□□□□ -1.38
SMG1-217ENST00000569764 C3orf70A6NLC5 250 aaPredicted RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 FIGNL2A6NMB9 653 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 ZNF716A6NP11 495 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 FAM171A2A8MVW0 826 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 DFFAO00273 331 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 TM9SF1O15321 606 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 ZNF735P0CB33 412 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 NR2F1P10589 423 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 CPN2P22792 545 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 KPNA2P52292 529 aaKnown RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 ITGA9Q13797 1035 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 NDUFA9Q16795 377 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 LYPLAL1Q5VWZ2 237 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 RAP1GAP2Q684P5 730 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 WBP2NLQ6ICG8 309 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 ZC3H7AQ8IWR0 971 aaKnown RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 ACTRT2Q8TDY3 377 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 HSD17B8Q92506 261 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 ULK4Q96C45 1275 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 PERPQ96FX8 193 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 C5orf30Q96GV9 206 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 CSPG4P5Q96PW8 444 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 SLC46A2Q9BY10 475 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 DUSP15Q9H1R2 295 aaPredicted RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 SLC6A17Q9H1V8 727 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 RIC8BQ9NVN3 520 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 CTNNAL1Q9UBT7 734 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 ANAPC7Q9UJX3 599 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 TDRKHQ9Y2W6 561 aaKnown RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 MAU2Q9Y6X3 613 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 IQCF5A8MTL0 148 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 IPO13O94829 963 aaKnown RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 RPS17P08708 135 aaKnown RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 UROSP10746 265 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 MSH3P20585 1137 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 M6PRP20645 277 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 CD72P21854 359 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 CD1BP29016 333 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 PCDH1Q08174 1060 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 PLK5Q496M5 336 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 NADK2Q4G0N4 442 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 TMEM196Q5HYL7 178 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 C11orf63Q6NUN7 778 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 NIPAL1Q6NVV3 410 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 CEACAM20Q6UY09 585 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 JOSD2Q8TAC2 188 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 RAB3IL1Q8TBN0 382 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 GPBAR1Q8TDU6 330 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 TFB1MQ8WVM0 346 aaKnown RBP6.4□□□□□ -1.38
SMG1-217ENST00000569764 ZIM3Q96PE6 472 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 VAT1Q99536 393 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 ZBTB18Q99592 522 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 NKIRAS1Q9NYS0 192 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 GTSE1Q9NYZ3 720 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 IL36AQ9UHA7 158 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 ZNF225Q9UK10 706 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 HS3ST3A1Q9Y663 406 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 SCN10AQ9Y5Y9 1956 aa6.4□□□□□ -1.38
SMG1-217ENST00000569764 TTC3P53804 2025 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 TXNDC9O14530 226 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 CALCBP10092 127 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 RPA2P15927 270 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 ENGP17813 658 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 PTAFRP25105 342 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 RPS5P46782 204 aaKnown RBP6.4□□□□□ -1.39
SMG1-217ENST00000569764 RGS4P49798 205 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 NAGLUP54802 743 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 IRX4P78413 519 aa6.4□□□□□ -1.39
SMG1-217ENST00000569764 SOX4Q06945 474 aaPredicted RBP6.4□□□□□ -1.39
SMG1-217ENST00000569764 ALKBH6Q3KRA9 238 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms