RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 PPA1Q15181 289 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 FAM189A2Q15884 450 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 KBTBD12Q3ZCT8 623 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 LRRC37A5PQ49AS3 106 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 CCDC158Q5M9N0 1113 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 C3P1Q6ZMU1 363 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 GDPGP1Q6ZNW5 385 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 C15orf52Q6ZUT6 534 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 TMEM99Q8N816 258 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 NUP37Q8NFH4 326 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 TAF15Q92804 592 aaKnown RBP eCLIP3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 C11orf52Q96A22 123 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 PANX3Q96QZ0 392 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 ZNF559Q9BR84 538 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 PARLQ9H300 379 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 RPF1Q9H9Y2 349 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 NDE1Q9NXR1 346 aa3.98□□□□□ -1.77
SHCBP1-206ENST00000567698 IGKV3D-15A0A087WSY6 115 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 A0A0A6YYC8 382 aaPredicted RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 A0A1W2PPR1 153 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 ANHXE9PGG2 379 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 I3L1I5 382 aaPredicted RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 SLC33A1O00400 549 aaPredicted RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 SIGLEC5O15389 551 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 P2RX6O15547 441 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 TTI1O43156 1089 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 SNAP91O60641 907 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 GLCEO94923 617 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 HSP90AB1P08238 724 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 CTNNA1P35221 906 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 AKAP17AQ02040 695 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 CETN1Q12798 172 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 C2CD6Q53TS8 623 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 ZNF789Q5FWF6 425 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 ARMCX4Q5H9R4 360 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 FGD3Q5JSP0 725 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 AGAP6Q5VW22 663 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 PLPP4Q5VZY2 271 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 Q6ZVQ6 151 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 ZER1Q7Z7L7 766 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 LRRTM1Q86UE6 522 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 ZNF440Q8IYI8 595 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 SMYD1Q8NB12 490 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 Q8NBF4 154 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 CHURC1Q8WUH1 139 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 ATXN7L3BQ96GX2 97 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 IL12RB2Q99665 862 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 CABLES2Q9BTV7 478 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 PAPOLGQ9BWT3 736 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 UPF3AQ9H1J1 476 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 ABCB8Q9NUT2 735 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 LNPEPQ9UIQ6 1025 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 FBXL5Q9UKA1 691 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 GMEB2Q9UKD1 530 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 PILRAQ9UKJ1 303 aa3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 NOL7Q9UMY1 257 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 MRPS18CQ9Y3D5 142 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-206ENST00000567698 TDRD15B5MCY1 1934 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 KPNA7A9QM74 516 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 IDH3BO43837 385 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 ATP9AO75110 1047 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 OR1D2P34982 312 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 TMEM50BP56557 158 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 ABRQ12979 859 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 FASTKD3Q14CZ7 662 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 MTHFSDQ2M296 383 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 GLIPR1L2Q4G1C9 344 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 GLRA4Q5JXX5 417 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 TCEAL6Q6IPX3 200 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 FAAP20Q6NZ36 180 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 SLC27A4Q6P1M0 643 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 C17orf107Q6ZR85 190 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 ZFAND4Q86XD8 727 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 OR10G7Q8NGN6 311 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 ATP8B4Q8TF62 1192 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 SLC35C1Q96A29 364 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 AGAP4Q96P64 663 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 PCDHB18PQ96TA0 734 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 VGLL1Q99990 258 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 RBM4BQ9BQ04 359 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 C17orf62Q9BQA9 187 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 DPEP2Q9H4A9 486 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 NCKAP1Q9Y2A7 1128 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 PRSS21Q9Y6M0 314 aa3.96□□□□□ -1.78
SHCBP1-206ENST00000567698 A0A0J9YWU9 116 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 A8MU76 341 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 SORBS2O94875 1100 aaKnown RBP3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 C8orf89P0DMQ9 161 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 GJB2P29033 226 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 GPR183P32249 361 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 FEN1P39748 380 aaKnown RBP3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 EVCP57679 992 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 DHODHQ02127 395 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 CNTN1Q12860 1018 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 LPAL2Q16609 132 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 ZNF674Q2M3X9 581 aa3.95□□□□□ -1.78
SHCBP1-206ENST00000567698 SNAI3Q3KNW1 292 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms