RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CYP4X1Q8N118 509 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 KRT78Q8N1N4 520 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 ELP5Q8TE02 316 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 ITLN2Q8WWU7 325 aaPredicted RBP17.47■□□□□ 0.39
LINC01238-205ENST00000567549 RBCK1Q9BYM8 510 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 CDCP1Q9H5V8 836 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 CNOT10Q9H9A5 744 aaKnown RBP17.47■□□□□ 0.39
LINC01238-205ENST00000567549 POPDC3Q9HBV1 291 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 TXNDC16Q9P2K2 825 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 MMACHCQ9Y4U1 282 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 NBPF19A0A087WUL8 3843 aa17.47■□□□□ 0.39
LINC01238-205ENST00000567549 SAGE2PA6NJ88 616 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 CCDC188H7C350 402 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 B4GALT2O60909 372 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 SLC25A12O75746 678 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 COX6B1P14854 86 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 ABOP16442 354 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 ZNF24P17028 368 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 EFNA3P52797 238 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 MAPKAPK3Q16644 382 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 CATSPEREQ5SY80 951 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 STEAP4Q687X5 459 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 NXPE4Q6UWF7 544 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 TCAIMQ8N3R3 496 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 UTP15Q8TED0 518 aaKnown RBP17.46■□□□□ 0.39
LINC01238-205ENST00000567549 CDKL2Q92772 493 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 TSPAN17Q96FV3 270 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 TSNARE1Q96NA8 513 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 OR4K3Q96R72 315 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 OLFM1Q99784 485 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 CCDC77Q9BR77 488 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 NPLQ9BXD5 320 aaPredicted RBP17.46■□□□□ 0.39
LINC01238-205ENST00000567549 DEFB126Q9BYW3 111 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 SLC6A16Q9GZN6 736 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 CTNNAL1Q9UBT7 734 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 SH3BGRL2Q9UJC5 107 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 KLF13Q9Y2Y9 288 aaPredicted RBP17.46■□□□□ 0.39
LINC01238-205ENST00000567549 OARD1Q9Y530 152 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 TEX264Q9Y6I9 313 aa17.46■□□□□ 0.39
LINC01238-205ENST00000567549 CELSR2Q9HCU4 2923 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 KLRC4-KLRK1H3BQV0 150 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 PRRG2O14669 202 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 SAT1P21673 171 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 HTR1EP28566 365 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 CLCN2P51788 898 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 TGM3Q08188 693 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 ZNF630Q2M218 657 aaPredicted RBP17.45■□□□□ 0.38
LINC01238-205ENST00000567549 MSS51Q4VC12 460 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 SPINK14Q6IE38 97 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 SBSNQ6UWP8 590 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 Q6ZPB1 254 aaPredicted RBP17.45■□□□□ 0.38
LINC01238-205ENST00000567549 GALNTL5Q7Z4T8 443 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 SPPL2CQ8IUH8 684 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 MCEMP1Q8IX19 187 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 OR5T3Q8NGG3 340 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 TSLPQ969D9 159 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 GAL3ST3Q96A11 431 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 FRMD6Q96NE9 622 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 SIGLEC12Q96PQ1 595 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 ANKRD10Q9NXR5 420 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 RNF14Q9UBS8 474 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 SLC22A14Q9Y267 594 aa17.45■□□□□ 0.38
LINC01238-205ENST00000567549 FAM95CA0A1B0GW59 222 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 TCRBV16S1A1N1A0A5B0 115 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 ANKDD1BA6NHY2 528 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 NPIPA5E9PKD4 350 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 ASNA1O43681 348 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 NME2P1O60361 137 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 BANF1O75531 89 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 NME2P22392 152 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 ELAVL4P26378 380 aaKnown RBP17.44■□□□□ 0.38
LINC01238-205ENST00000567549 HLCSP50747 726 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 PMP22Q01453 160 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 PPP1R3AQ16821 1122 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 SRRM1Q8IYB3 904 aaKnown RBP17.44■□□□□ 0.38
LINC01238-205ENST00000567549 TRIM45Q9H8W5 580 aaPredicted RBP17.44■□□□□ 0.38
LINC01238-205ENST00000567549 GPRC5BQ9NZH0 403 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 NPIPA1Q9UND3 350 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 ZNF835Q9Y2P0 537 aa17.44■□□□□ 0.38
LINC01238-205ENST00000567549 OR2W5A6NFC9 320 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 IVDP26440 423 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 TRHRP34981 398 aaPredicted RBP17.43■□□□□ 0.38
LINC01238-205ENST00000567549 HNF4AP41235 474 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 HSD17B7P56937 341 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 MLF1P58340 268 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 RAB8AP61006 207 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 OLR1P78380 273 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 TOR1AIP1Q5JTV8 583 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 CDKL4Q5MAI5 379 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 TMIGD1Q6UXZ0 262 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 ZC3HC1Q86WB0 502 aaKnown RBP17.43■□□□□ 0.38
LINC01238-205ENST00000567549 IGDCC3Q8IVU1 814 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 KLHL7Q8IXQ5 586 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 TMEM156Q8N614 296 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 ROGDIQ9GZN7 287 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 RHOJQ9H4E5 214 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 COPS7BQ9H9Q2 264 aaPredicted RBP17.43■□□□□ 0.38
LINC01238-205ENST00000567549 SAR1BQ9Y6B6 198 aa17.43■□□□□ 0.38
LINC01238-205ENST00000567549 NPEPPSL1A6NEC2 478 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms