RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 EEF1DP29692 281 aaKnown RBP12.76□□□□□ -0.37
CLK3-218ENST00000566926 OTX2P32243 289 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 OR1D4P47884 311 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 AVPR1BP47901 424 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 RPL14P50914 215 aaKnown RBP12.76□□□□□ -0.37
CLK3-218ENST00000566926 PKNOX1P55347 436 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 NFATC3Q12968 1075 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 CDC16Q13042 620 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 NKG7Q16617 165 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 TCTN3Q6NUS6 607 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 ZNF605Q86T29 641 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 THOC6Q86W42 341 aaKnown RBP12.76□□□□□ -0.37
CLK3-218ENST00000566926 ZNF483Q8TF39 744 aaPredicted RBP12.76□□□□□ -0.37
CLK3-218ENST00000566926 SLC5A11Q8WWX8 675 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 ABHD17AQ96GS6 310 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 SEC16BQ96JE7 1060 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 ZNF382Q96SR6 550 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 SORT1Q99523 831 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 SARGQ9BW04 601 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 CD244Q9BZW8 370 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 ING2Q9H160 280 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 GSTO2Q9H4Y5 243 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 SLC22A11Q9NSA0 550 aa12.76□□□□□ -0.37
CLK3-218ENST00000566926 ZNF282Q9UDV7 671 aaPredicted RBP12.76□□□□□ -0.37
CLK3-218ENST00000566926 TNRC6AQ8NDV7 1962 aaKnown RBP12.76□□□□□ -0.37
CLK3-218ENST00000566926 TRBC2A0A5B9 178 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 NCF1BA6NI72 391 aaPredicted RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 TRPC5OSA6NMA1 111 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 NCF1CA8MVU1 366 aaPredicted RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 K7EPI3 171 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 E2F3O00716 465 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 STK16O75716 305 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 OTCP00480 354 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 FGF4P08620 206 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 SLC35G6P0C7Q6 338 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 NCF1P14598 390 aaPredicted RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 ALOX15P16050 662 aaPredicted RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 CLCQ05315 142 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 DSG2Q14126 1118 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 HKDC1Q2TB90 917 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 LACTB2Q53H82 288 aaPredicted RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 UNC50Q53HI1 259 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 ASPGQ86U10 573 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 PLD3Q8IV08 490 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 KLHDC8AQ8IYD2 350 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 MFSD9Q8NBP5 474 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 OR4K1Q8NGD4 311 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 MIEF2Q96C03 454 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 MMABQ96EY8 250 aaPredicted RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 C10orf90Q96M02 699 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 CCT7Q99832 543 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 AIF1LQ9BQI0 150 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 PELI2Q9HAT8 420 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 NPHS2Q9NP85 383 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 SEMA3GQ9NS98 782 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 MRGBPQ9NV56 204 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 OPTCQ9UBM4 332 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 PCTPQ9UKL6 214 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 SLC22A14Q9Y267 594 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 ANGPTL3Q9Y5C1 460 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 PCDHGB7Q9Y5F8 929 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 PCDHGA9Q9Y5G4 932 aaKnown RBP12.75□□□□□ -0.37
CLK3-218ENST00000566926 USH1CQ9Y6N9 552 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 MAU2Q9Y6X3 613 aa12.75□□□□□ -0.37
CLK3-218ENST00000566926 SMG1Q96Q15 3661 aaKnown RBP12.74□□□□□ -0.37
CLK3-218ENST00000566926 FEZF1A0PJY2 475 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 VSTM2BA6NLU5 285 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 H0YIG0 161 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 EBAG9O00559 213 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 HDAC3O15379 428 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 ITM2AO43736 263 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 LYPLA1O75608 230 aaPredicted RBP12.74□□□□□ -0.37
CLK3-218ENST00000566926 DCTN3O75935 186 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 ESRRBO95718 433 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 EPB42P16452 691 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 GNAZP19086 355 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 MMP11P24347 488 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 CXCR2P25025 360 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 AHRP35869 848 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 CCL11P51671 97 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 SKP1P63208 163 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 ATP1A4Q13733 1029 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 ZXDCQ2QGD7 858 aaPredicted RBP12.74□□□□□ -0.37
CLK3-218ENST00000566926 CES4AQ5XG92 561 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 NIPAL1Q6NVV3 410 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 COX15Q7KZN9 410 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 MRGPREQ86SM8 312 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 CUZD1Q86UP6 607 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 METTL27Q8N6F8 245 aaPredicted RBP12.74□□□□□ -0.37
CLK3-218ENST00000566926 ZNF781Q8N8C0 355 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 CLEC1AQ8NC01 280 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 STT3BQ8TCJ2 826 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 SLC13A3Q8WWT9 602 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 NEIL2Q969S2 332 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 TM4SF19Q96DZ7 209 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 OR4K3Q96R72 315 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 SPSB2Q99619 263 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 SLC25A23Q9BV35 468 aa12.74□□□□□ -0.37
CLK3-218ENST00000566926 YIPF2Q9BWQ6 316 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms