RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SLC24A2Q9UI40 661 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 ZNF180Q9UJW8 692 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 GRID1Q9ULK0 1009 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SH2B3Q9UQQ2 575 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PDE10AQ9Y233 779 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 KLHL20Q9Y2M5 609 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PCDHA9Q9Y5H5 950 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 MPDZO75970 2070 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 A0A1W2PPV9 198 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PDZK1P1A8MUH7 402 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TARM1B6A8C7 271 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 E5RI56 91 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 H3BQF6 201 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 BTN3A3O00478 584 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PPP6CO00743 305 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 HCRTR1O43613 425 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 NUDT21O43809 227 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 KIF1CO43896 1103 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PRAMEF4O60810 478 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 VPS26AO75436 327 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 KIAA0754O94854 1291 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 FTH1P02794 183 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 MT-ND3P03897 115 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 THRAP10827 490 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 F3P13726 295 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 MTHFD2P13995 350 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 COX6B1P14854 86 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 ZNF37AP17032 561 aaPredicted RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TYRP1P17643 537 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 XRCC1P18887 633 aaPredicted RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 KRT4P19013 534 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 CD9P21926 228 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PEBP1P30086 187 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PPARGP37231 505 aaPredicted RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 GDNFP39905 211 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 MAPK9P45984 424 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 AGTR2P50052 363 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 SLC18A2Q05940 514 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 IFFO1Q0D2I5 559 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 ILF3Q12906 894 aaKnown RBP eCLIP5.88□□□□□ -1.471e-9■■■■□ 24.3
UBFD1-204ENST00000565634 GPR18Q14330 331 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PLEKHS1Q5SXH7 462 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PRAMEF9Q5VWM5 478 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 SBSNQ6UWP8 590 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 WASH2PQ6VEQ5 465 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 CEP128Q6ZU80 1094 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 C22orf34Q6ZV56 151 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 RAPH1Q70E73 1250 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TAOK1Q7L7X3 1001 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 LRRC56Q8IYG6 542 aaPredicted RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 ARHGEF39Q8N4T4 335 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 BANPQ8N9N5 519 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 LINC01555Q8NAE3 123 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 OR6C4Q8NGE1 309 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 HM13Q8TCT9 377 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 CDKL2Q92772 493 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 KCNJ9Q92806 393 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TLCD1Q96CP7 247 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TTC1Q99614 292 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 GSDMCQ9BYG8 508 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 ULBP3Q9BZM4 244 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.88□□□□□ -1.471e-11■■■■□ 20.7
UBFD1-204ENST00000565634 ALG9Q9H6U8 611 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 SYNPO2LQ9H987 977 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 MLXIPLQ9NP71 852 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 WASH6PQ9NQA3 447 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 IMP3Q9NV31 184 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 UTP6Q9NYH9 597 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 CPSF2Q9P2I0 782 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 PSMC3IPQ9P2W1 217 aaPredicted RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 CPNE7Q9UBL6 633 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TRMT6Q9UJA5 497 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 ACSL5Q9ULC5 683 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 ICKQ9UPZ9 632 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TDRKHQ9Y2W6 561 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 ACOT9Q9Y305 439 aa5.88□□□□□ -1.47
UBFD1-204ENST00000565634 TMEM184BQ9Y519 407 aaPredicted RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
UBFD1-204ENST00000565634 IGHV1OR21-1A0A087WYE8 117 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 OR6C74A6NCV1 312 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 NCF1BA6NI72 391 aaPredicted RBP5.87□□□□□ -1.47
UBFD1-204ENST00000565634 NCF1CA8MVU1 366 aaPredicted RBP5.87□□□□□ -1.47
UBFD1-204ENST00000565634 B4E171 279 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 G3V2L1 256 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 H3BS24 57 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 UBXN8O00124 270 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 BTN3A1O00481 513 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 LIN7AO14910 233 aaPredicted RBP5.87□□□□□ -1.47
UBFD1-204ENST00000565634 POLR1CO15160 346 aaPredicted RBP5.87□□□□□ -1.47
UBFD1-204ENST00000565634 PSIP1O75475 530 aaKnown RBP5.87□□□□□ -1.47
UBFD1-204ENST00000565634 ERLIN1O75477 346 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 KLHL2O95198 593 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 GUCA1CO95843 209 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 APOA4P06727 396 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 C8BP07358 591 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 TUBBP07437 444 aa5.87□□□□□ -1.47
UBFD1-204ENST00000565634 MTHFD1P11586 935 aaKnown RBP5.87□□□□□ -1.47
UBFD1-204ENST00000565634 NCF1P14598 390 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms