RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 SLC34A3Q8N130 599 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 KRT78Q8N1N4 520 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 KIF2BQ8N4N8 673 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 AFAP1L2Q8N4X5 818 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 TMEM178AQ8NBL3 297 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 FAM98AQ8NCA5 519 aaKnown RBP6.02□□□□□ -1.45
TCF4-228ENST00000565393 CREB3L4Q8TEY5 395 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 THAP3Q8WTV1 239 aaPredicted RBP6.02□□□□□ -1.45
TCF4-228ENST00000565393 ANKRD49Q8WVL7 239 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 ESAMQ96AP7 390 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 TMEM125Q96AQ2 219 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 TSPAN17Q96FV3 270 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 WDR83Q9BRX9 315 aaKnown RBP6.02□□□□□ -1.45
TCF4-228ENST00000565393 ERP44Q9BS26 406 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 HES7Q9BYE0 225 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 SLC6A16Q9GZN6 736 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 TSPAN10Q9H1Z9 355 aaPredicted RBP6.02□□□□□ -1.45
TCF4-228ENST00000565393 SPNS1Q9H2V7 528 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 RHOJQ9H4E5 214 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 RUBCNLQ9H714 662 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 CNOT10Q9H9A5 744 aaKnown RBP6.02□□□□□ -1.45
TCF4-228ENST00000565393 NECTIN3Q9NQS3 549 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 PRDM9Q9NQV7 894 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 WWOXQ9NZC7 414 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 FBXW2Q9UKT8 454 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 NPIPA1Q9UND3 350 aa6.02□□□□□ -1.45
TCF4-228ENST00000565393 TNRC6AQ8NDV7 1962 aaKnown RBP6.02□□□□□ -1.45
TCF4-228ENST00000565393 SMG1Q96Q15 3661 aaKnown RBP6.02□□□□□ -1.45
TCF4-228ENST00000565393 A0A088AWK7 358 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 MYOCOSA0A1B0GUC4 107 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 CTAGE15A4D2H0 777 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 LRIT2A6NDA9 550 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 FAM187AA6NFU0 413 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 CXorf49A8MYA2 514 aaPredicted RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 KLRC4-KLRK1H3BQV0 150 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 FCHO1O14526 889 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 TAPBPO15533 448 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 PHGDHO43175 533 aaKnown RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 HNRNPRO43390 633 aaKnown RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 ERI3O43414 337 aaKnown RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 ASNA1O43681 348 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 B3GALT2O43825 422 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 CCNT2O60583 730 aaKnown RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 STK16O75716 305 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 IFNA16P05015 189 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 SMIM10L1P0DMW3 83 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 STMN1P16949 149 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 ZNF10P21506 573 aaPredicted RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 TPP2P29144 1249 aaPredicted RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 HPDP32754 393 aaPredicted RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 SPRP35270 261 aaPredicted RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 HSPA7P48741 367 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 TDGF1P3P51864 188 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 PLTPP55058 493 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 ATP6V0D1P61421 351 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 REEP5Q00765 189 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 BMPR2Q13873 1038 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 PPP1R3AQ16821 1122 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 GRTP1Q5TC63 336 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 SULT1C3Q6IMI6 304 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 MTFR2Q6P444 385 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 SLCO4C1Q6ZQN7 724 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 QSOX2Q6ZRP7 698 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 ADAMTSL2Q86TH1 951 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 CTAGE6Q86UF2 777 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 CCDC25Q86WR0 208 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 KLHDC8AQ8IYD2 350 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 CA13Q8N1Q1 262 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 TCAIMQ8N3R3 496 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 TMEM156Q8N614 296 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 MDS2Q8NDY4 140 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 SPATA4Q8NEY3 305 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 TTLQ8NG68 377 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 STAG3L4Q8TBR4 150 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 ELP5Q8TE02 316 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 MARVELD3Q96A59 401 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 RHBDF1Q96CC6 855 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 MRRFQ96E11 262 aaKnown RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 SMIM10Q96HG1 83 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 CCDC77Q9BR77 488 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 REXO4Q9GZR2 422 aaKnown RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 POPDC3Q9HBV1 291 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 PRTFDC1Q9NRG1 225 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 SMYD2Q9NRG4 433 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 DNAJC11Q9NVH1 559 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 WHRNQ9P202 907 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 RNF112Q9ULX5 631 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 PYCARDQ9ULZ3 195 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 UTP11Q9Y3A2 253 aaKnown RBP6.01□□□□□ -1.45
TCF4-228ENST00000565393 PCDHGB6Q9Y5F9 930 aa6.01□□□□□ -1.45
TCF4-228ENST00000565393 HELZ2Q9BYK8 2649 aaKnown RBP6□□□□□ -1.45
TCF4-228ENST00000565393 CFAP46Q8IYW2 2715 aa6□□□□□ -1.45
TCF4-228ENST00000565393 TRBV11-1A0A0K0K1C0 115 aa6□□□□□ -1.45
TCF4-228ENST00000565393 TCRBV16S1A1N1A0A5B0 115 aa6□□□□□ -1.45
TCF4-228ENST00000565393 E7ESA3 106 aa6□□□□□ -1.45
TCF4-228ENST00000565393 TP73O15350 636 aa6□□□□□ -1.45
TCF4-228ENST00000565393 EIF3HO15372 352 aaKnown RBP eCLIP6□□□□□ -1.45
TCF4-228ENST00000565393 ZNHIT1O43257 154 aa6□□□□□ -1.45
TCF4-228ENST00000565393 CTNSO60931 367 aa6□□□□□ -1.45
TCF4-228ENST00000565393 SH3BGRLO75368 114 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms