RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CAMKVQ8NCB2 501 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 SRFBP1Q8NEF9 429 aaKnown RBP20.92■□□□□ 0.94
LINC01960-201ENST00000563759 OR6C4Q8NGE1 309 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 NT5CQ8TCD5 201 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 C16orf78Q8WTQ4 265 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 TCEAL3Q969E4 200 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 MYNNQ9NPC7 610 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 GID8Q9NWU2 228 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 KLHL3Q9UH77 587 aa20.92■□□□□ 0.94
LINC01960-201ENST00000563759 KIF1CO43896 1103 aaKnown RBP20.91■□□□□ 0.94
LINC01960-201ENST00000563759 RASSF9O75901 435 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 C21orf58P58505 322 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 TAS2R50P59544 299 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 PAGE3Q5JUK9 113 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 BNC2Q6ZN30 1099 aaPredicted RBP20.91■□□□□ 0.94
LINC01960-201ENST00000563759 UBE3DQ7Z6J8 389 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 MINDY1Q8N5J2 469 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 OR52E6Q96RD3 313 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 CD180Q99467 661 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 LHX9Q9NQ69 397 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 SOHLH2Q9NX45 425 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 MAP10Q9P2G4 905 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 EPHA6Q9UF33 1036 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 ADAM29Q9UKF5 820 aa20.91■□□□□ 0.94
LINC01960-201ENST00000563759 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.91■□□□□ 0.94
LINC01960-201ENST00000563759 LOC105369274A0A096LPK9 316 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 LOC102723532A0A0G2JNH3 316 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 H0YGG7 62 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 EIF2S1P05198 315 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 KIR3DL1P43629 444 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 ARF3P61204 181 aaPredicted RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 TLR1Q15399 786 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 MAPKAPK3Q16644 382 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 UGT8Q16880 541 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 TRMT5Q32P41 509 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 IKBIPQ70UQ0 350 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 GPR180Q86V85 440 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 OR4N4Q8N0Y3 316 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 KCT2Q8NC54 265 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 OR7A2PQ8NGA2 310 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 GAL3ST3Q96A11 431 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 PRPF18Q99633 342 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 COPS7BQ9H9Q2 264 aaPredicted RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 CROTQ9UKG9 612 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 CPED1A4D0V7 1026 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 C4orf51C9J302 202 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 P2RX6O15547 441 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 PCDHGA12O60330 932 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 MLLT3P42568 568 aaPredicted RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 ARFIP1P53367 373 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 RAB8AP61006 207 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 PSME3P61289 254 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 SRSF11Q05519 484 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 DEFB110Q30KQ9 67 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 ZC3H12BQ5HYM0 836 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 C6orf10Q5SRN2 563 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 GUSBP11Q6P575 273 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 ABHD17CQ6PCB6 329 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 SPRED1Q7Z699 444 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 PLXDC1Q8IUK5 500 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 SCUBE1Q8IWY4 988 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 ULK2Q8IYT8 1036 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 FAM181AQ8N9Y4 354 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 TM4SF19Q96DZ7 209 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 TCTN2Q96GX1 697 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 CLPTM1LQ96KA5 538 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 TEFMQ96QE5 360 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 SLC39A3Q9BRY0 314 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 DDX31Q9H8H2 851 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 FAM60AQ9NP50 221 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 PRPF19Q9UMS4 504 aaKnown RBP20.9■□□□□ 0.94
LINC01960-201ENST00000563759 GPR179Q6PRD1 2367 aa20.9■□□□□ 0.94
LINC01960-201ENST00000563759 SPTBP11277 2137 aa20.89■□□□□ 0.94
LINC01960-201ENST00000563759 URADA6NGE7 173 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 SH3BP5O60239 455 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 IL3P08700 152 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 PNLIPP16233 465 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 RPL3P39023 403 aaKnown RBP20.89■□□□□ 0.93
LINC01960-201ENST00000563759 PLIN5Q00G26 463 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 C2orf80Q0P641 193 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 ANKRD26P1Q6NSI1 321 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 DHDDSQ86SQ9 333 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 OR8K5Q8NH50 307 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.89■□□□□ 0.93
LINC01960-201ENST00000563759 ZCCHC10Q8TBK6 192 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 TBCDQ9BTW9 1192 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 REEP4Q9H6H4 257 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 RMND5AQ9H871 391 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 SPAG4Q9NPE6 437 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 MIEF1Q9NQG6 463 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 PCDHGA7Q9Y5G6 932 aa20.89■□□□□ 0.93
LINC01960-201ENST00000563759 MAP3K7O43318 606 aa20.88■□□□□ 0.93
LINC01960-201ENST00000563759 B4GAT1O43505 415 aa20.88■□□□□ 0.93
LINC01960-201ENST00000563759 ZNF888P0CJ79 500 aaPredicted RBP20.88■□□□□ 0.93
LINC01960-201ENST00000563759 HIST1H1TP22492 207 aaPredicted RBP20.88■□□□□ 0.93
LINC01960-201ENST00000563759 TSFMP43897 325 aaKnown RBP20.88■□□□□ 0.93
LINC01960-201ENST00000563759 VSX2P58304 361 aaPredicted RBP20.88■□□□□ 0.93
LINC01960-201ENST00000563759 CPTPQ5TA50 214 aa20.88■□□□□ 0.93
LINC01960-201ENST00000563759 OR4F3Q6IEY1 312 aa20.88■□□□□ 0.93
LINC01960-201ENST00000563759 ZNF793Q6ZN11 406 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms