RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SONP18583 2426 aaKnown RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ERI2A8K979 691 aaKnown RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ESPNB1AK53 854 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 F8W8V4 182 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 G3V3Y1 287 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 SLC16A5O15375 505 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 PSMD3O43242 534 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 CHST10O43529 356 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 PRMT3O60678 531 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ITGA10O75578 1167 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TJP3O95049 919 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 IPO7O95373 1038 aaKnown RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 LY6G6DO95868 133 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 C8BP07358 591 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 CD53P19397 219 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 DNASE1P24855 282 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ZFP36L2P47974 494 aaKnown RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 HNRNPFP52597 415 aaKnown RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ADARP55265 1226 aaKnown RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 RWDD2BP57060 319 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 RPS15AP62244 130 aaKnown RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TIAL1Q01085 375 aaKnown RBP eCLIP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 SPA17Q15506 151 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 XKR6Q5GH73 641 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ACAD11Q709F0 780 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TRILQ7L0X0 811 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ASPGQ86U10 573 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 CLYBLQ8N0X4 340 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TMEM251Q8N6I4 163 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 PSD4Q8NDX1 1056 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TMEM52Q8NDY8 209 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 OR2M7Q8NG81 312 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 MAGEC3Q8TD91 643 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TBC1D20Q96BZ9 403 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 DOCK7Q96N67 2140 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 FOPNLQ96NB1 174 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 FERMT1Q9BQL6 677 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 SARGQ9BW04 601 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TTTY12Q9BZ98 90 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ANKHQ9HCJ1 492 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 SEMA4BQ9NPR2 832 aaPredicted RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TMEM184CQ9NVA4 438 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 ADAMTS6Q9UKP5 1117 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 PCDHA13Q9Y5I0 950 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 MRFAP1Q9Y605 127 aa9.63□□□□□ -0.87
SF3B3-204ENST00000563739 EPN1Q9Y6I3 576 aaPredicted RBP9.63□□□□□ -0.87
SF3B3-204ENST00000563739 TRBV11-1A0A0K0K1C0 115 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 A8MUA0 341 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 KPNA5O15131 536 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 LIASO43766 372 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 NDUFS3O75489 264 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 OR6B1O95007 311 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 CATP04040 527 aaKnown RBP9.62□□□□□ -0.87
SF3B3-204ENST00000563739 RAF1P04049 648 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 ZSCAN5DPP0CG00 497 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 SMIM10L1P0DMW3 83 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 MAGEA5P43359 124 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 WNT3P56703 355 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 MEF2AQ02078 507 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-204ENST00000563739 ACTN3Q08043 901 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-204ENST00000563739 SIX1Q15475 284 aaPredicted RBP9.62□□□□□ -0.87
SF3B3-204ENST00000563739 FLYWCH1Q4VC44 716 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 PCID2Q5JVF3 399 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 CLEC9AQ6UXN8 241 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 B3GNT6Q6ZMB0 384 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 PPP1R21Q6ZMI0 780 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 CHSY3Q70JA7 882 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 PIWIL4Q7Z3Z4 852 aaKnown RBP9.62□□□□□ -0.87
SF3B3-204ENST00000563739 SCUBE1Q8IWY4 988 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 PRELID2Q8N945 189 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 MFSD9Q8NBP5 474 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 ACRBPQ8NEB7 543 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 CD200R1Q8TD46 325 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 LRRC45Q96CN5 670 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 SMIM10Q96HG1 83 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 SMC6Q96SB8 1091 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 TTC1Q99614 292 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 SGPP1Q9BX95 441 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 LIN28AQ9H9Z2 209 aaKnown RBP9.62□□□□□ -0.87
SF3B3-204ENST00000563739 SYBUQ9NX95 663 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 KCMF1Q9P0J7 381 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 CRYL1Q9Y2S2 319 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 ARID1AO14497 2285 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 HIVEP2P31629 2446 aa9.62□□□□□ -0.87
SF3B3-204ENST00000563739 MED12Q93074 2177 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 EXPH5Q8NEV8 1989 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 TCRBV7S3A2A0A539 114 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 KLRC4-KLRK1H3BQV0 150 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 B4GALT2O60909 372 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 VAPBO95292 243 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 ESR1P03372 595 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 PTMAP06454 111 aaKnown RBP9.61□□□□□ -0.87
SF3B3-204ENST00000563739 ZNF888P0CJ79 500 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-204ENST00000563739 MPC1LP0DKB6 136 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 CDH1P12830 882 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 FDFT1P37268 417 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 KIR2DL3P43628 341 aa9.61□□□□□ -0.87
SF3B3-204ENST00000563739 SESN2P58004 480 aaPredicted RBP9.61□□□□□ -0.87
SF3B3-204ENST00000563739 PPIAP62937 165 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms