RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 A0A1W2PQ72 361 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 IDSB3KWA1 339 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 H0YIV9 168 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 PRPF4O43172 522 aaKnown RBP eCLIP8.07□□□□□ -1.12
UBR1-204ENST00000563239 CHST10O43529 356 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 PLIN3O60664 434 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 UGDHO60701 494 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 CEACAM4O75871 244 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 PDGFAP04085 211 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 CREB1P16220 341 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 KRT15P19012 456 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 KRT4P19013 534 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 TSPAN8P19075 237 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 GSTM2P28161 218 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 CRHR1P34998 444 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 PIK3CGP48736 1102 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 PRKAA2P54646 552 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 CDH13P55290 713 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 OCA2Q04671 838 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ZNF844Q08AG5 666 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 Q0VFX4 171 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 KCNAB2Q13303 367 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 RUNX2Q13950 521 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 PAGE2BQ5JRK9 111 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 DCAF10Q5QP82 559 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ZNF678Q5SXM1 525 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 LIPJQ5W064 366 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 MED27Q6P2C8 311 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ABHD17CQ6PCB6 329 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 TMEM205Q6UW68 189 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 MED25Q71SY5 747 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ABHD13Q7L211 337 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 TRABD2AQ86V40 505 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 RAB43Q86YS6 212 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 CNPY4Q8N129 248 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 C4orf33Q8N1A6 199 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 OR11G2Q8NGC1 345 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 WDR20Q8TBZ3 569 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 GAL3ST3Q96A11 431 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 NACC2Q96BF6 587 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 C8orf44Q96CB5 159 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ABHD17AQ96GS6 310 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 TMEM237Q96Q45 408 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 F2RL3Q96RI0 385 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 CRB3Q9BUF7 120 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 NTMT1Q9BV86 223 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ROPN1BQ9BZX4 212 aaPredicted RBP8.07□□□□□ -1.12
UBR1-204ENST00000563239 VN1R1Q9GZP7 353 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ING2Q9H160 280 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ADNPQ9H2P0 1102 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ACTR8Q9H981 624 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ROPN1Q9HAT0 212 aaPredicted RBP8.07□□□□□ -1.12
UBR1-204ENST00000563239 MLXIPLQ9NP71 852 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 SEMA4BQ9NPR2 832 aaPredicted RBP8.07□□□□□ -1.12
UBR1-204ENST00000563239 RRAGDQ9NQL2 400 aaPredicted RBP8.07□□□□□ -1.12
UBR1-204ENST00000563239 PRDM7Q9NQW5 492 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 SEMA3GQ9NS98 782 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 C14orf105Q9NVL8 296 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 C3orf18Q9UK00 162 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 PLAAQ9Y263 795 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 ANGPTL3Q9Y5C1 460 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 MED13Q9UHV7 2174 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 SCN3AQ9NY46 2000 aa8.07□□□□□ -1.12
UBR1-204ENST00000563239 LOC102723996A0A087X1L8 192 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ANKDD1BA6NHY2 528 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 FAM227AF5H4B4 570 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 AGPSO00116 658 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ERI3O43414 337 aaKnown RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 GLRA3O75311 464 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ALOX12BO75342 701 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 CLDN9O95484 217 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ETHE1O95571 254 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 IGHEP01854 428 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 TUBBP07437 444 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 PCNAP12004 261 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 IMPDH1P20839 514 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ATP5F1P24539 256 aaPredicted RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 XCR1P46094 333 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 CCL11P51671 97 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 NEK2P51955 445 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 PLA2G16P53816 162 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 EMP2P54851 167 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 STXBP1P61764 594 aaKnown RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 HERVK_113P63132 956 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 BTN3A2P78410 334 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 RHAGQ02094 409 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ZRSR2Q15696 482 aaKnown RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 HIST2H2ACQ16777 129 aaPredicted RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 HIST2H2AA3Q6FI13 130 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 LETMD1Q6P1Q0 360 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ZYG11AQ6WRX3 759 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 ZNF793Q6ZN11 406 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 CA13Q8N1Q1 262 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 RIBC1Q8N443 379 aaPredicted RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 TMEM102Q8N9M5 508 aaPredicted RBP8.06□□□□□ -1.12
UBR1-204ENST00000563239 BANPQ8N9N5 519 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 OR2L5Q8NG80 312 aa8.06□□□□□ -1.12
UBR1-204ENST00000563239 HUS1BQ8NHY5 278 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms