RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 UPK1BO75841 260 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CATP04040 527 aaKnown RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SEMG1P04279 462 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 C8AP07357 584 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 PRKACAP17612 351 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 VIPR1P32241 457 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 HNF4AP41235 474 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 BDKRB1P46663 353 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 ITGA1P56199 1179 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 GALK2Q01415 458 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 ZNF33BQ06732 778 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 TSTA3Q13630 321 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 MAD2L1BPQ15013 274 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CCSMST1Q4G0I0 132 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 BRAT1Q6PJG6 821 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 TSPYL5Q86VY4 417 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 OR2A12Q8NGT7 310 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 DEPDC7Q96QD5 511 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 DSN1Q9H410 356 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 STOX2Q9P2F5 926 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 NDRG4Q9ULP0 352 aaKnown RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SATB2Q9UPW6 733 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 MYOFQ9NZM1 2061 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 GABRR3A8MPY1 467 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SUV39H1O43463 412 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SLCO2B1O94956 709 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 AP2A2O94973 939 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 ETHE1O95571 254 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 C9P02748 559 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 XPAP23025 273 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 PBLDP30039 288 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CD6P30203 668 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 HOXA9P31269 272 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 ASMTP46597 345 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 VEZF1Q14119 521 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CLCA4Q14CN2 919 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 POM121L1PQ3SYA9 428 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 ATAD3CQ5T2N8 411 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SYNPOQ8N3V7 929 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 LILRA3Q8N6C8 439 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 UBE2FQ969M7 185 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CCNB1IP1Q9NPC3 277 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CAB39Q9Y376 341 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 PSIP1O75475 530 aaKnown RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 GNRH1P01148 92 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 MASP1P48740 699 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 DEFB103AP81534 67 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 TLE2Q04725 743 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 ZNF284Q2VY69 593 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 PXDC1Q5TGL8 231 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SLX4IPQ5VYV7 408 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CCBE1Q6UXH8 406 aaPredicted RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 AHSA2Q719I0 299 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 NPAS3Q8IXF0 933 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 RHOXF1Q8NHV9 184 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SPPL2AQ8TCT8 520 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 RPL3LQ92901 407 aaKnown RBP10.55□□□□□ -0.72
NEIL1-202ENST00000561643 ASAH2Q9NR71 780 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 SIRT5Q9NXA8 310 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 MAFFQ9ULX9 164 aa10.55□□□□□ -0.72
NEIL1-202ENST00000561643 CXorf51AA0A1B0GTR3 108 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 FADS2P1A8MWK0 482 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 H0YIV9 168 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 SSX4O60224 188 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 LEFTY1O75610 366 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 SLC16A8O95907 504 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 KRT20P35900 424 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 CTSCP53634 463 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 RPP38P78345 283 aaKnown RBP10.54□□□□□ -0.72
NEIL1-202ENST00000561643 NPRL3Q12980 569 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 CADM2Q8N3J6 435 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 OR4A15Q8NGL6 344 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 TIFAQ96CG3 184 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 OR4K3Q96R72 315 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 BCL7BQ9BQE9 202 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 BTBD2Q9BX70 525 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 NECTIN3Q9NQS3 549 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 RAPGEFL1Q9UHV5 662 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 OBSL1O75147 1896 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 CCL16O15467 120 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 HSD3B1P14060 373 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 PPIBP23284 216 aaKnown RBP10.54□□□□□ -0.72
NEIL1-202ENST00000561643 HSD3B2P26439 372 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 RRM2P31350 389 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 CASP9P55211 416 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 GAB1Q13480 694 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 SYT6Q5T7P8 510 aaPredicted RBP10.54□□□□□ -0.72
NEIL1-202ENST00000561643 ANXA8L1Q5VT79 327 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 GPR155Q7Z3F1 870 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 TMPRSS11BQ86T26 416 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 P3H2Q8IVL5 708 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 SYTL1Q8IYJ3 562 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 TRAM1L1Q8N609 369 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 OR7G3Q8NG95 312 aa10.54□□□□□ -0.72
NEIL1-202ENST00000561643 HUS1BQ8NHY5 278 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms