RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 RPLP0P05388 317 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 CAPN1P07384 714 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SERPINA6P08185 405 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 CEACAM1P13688 526 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 ACPPP15309 386 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 PCSK2P16519 638 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 NELFEP18615 380 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TSPAN8P19075 237 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 MAGP20916 626 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 BCL6P41182 706 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 KRT6CP48668 564 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 MRPL19P49406 292 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 HTR6P50406 440 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 PDX1P52945 283 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SEC24CP53992 1094 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 GFERP55789 205 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 RPS15AP62244 130 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 GNGT1P63211 74 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 HSD11B2P80365 405 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 DAB2P98082 770 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TBL3Q12788 808 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 HYAL2Q12891 473 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 CSTF3Q12996 717 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TUBB3Q13509 450 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 PWP1Q13610 501 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 CUL3Q13618 768 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SLBPQ14493 270 aaKnown RBP eCLIP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 KIAA0040Q15053 153 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TRIP6Q15654 476 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 XKR6Q5GH73 641 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SH2D4BQ5SQS7 431 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 DEPDC1Q5TB30 811 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 THEMIS2Q5TEJ8 643 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 ARMC6Q6NXE6 501 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 MED27Q6P2C8 311 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 GALNT18Q6P9A2 607 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TMIGD1Q6UXZ0 262 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 USP53Q70EK8 1073 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 LARP4Q71RC2 724 aaKnown RBP eCLIP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 MED25Q71SY5 747 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TMPRSS11BQ86T26 416 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SLCO6A1Q86UG4 719 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TRIM73Q86UV7 250 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TAX1BP1Q86VP1 789 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 CRLF3Q8IUI8 442 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 MCATQ8IVS2 390 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 WDR75Q8IWA0 830 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 KRT78Q8N1N4 520 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 AFAP1L2Q8N4X5 818 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 CDYL2Q8N8U2 506 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 BMPERQ8N8U9 685 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 DCBLD1Q8N8Z6 715 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 Q8N9G6 341 aaPredicted RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 C19orf47Q8N9M1 422 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SNX31Q8N9S9 440 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 GALNT11Q8NCW6 608 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TRPV3Q8NET8 790 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 HUS1BQ8NHY5 278 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 METTL6Q8TCB7 284 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 NT5CQ8TCD5 201 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 ACTRT2Q8TDY3 377 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 NCSTNQ92542 709 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 ATP6V1E2Q96A05 226 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 REPS1Q96D71 796 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 NUDT22Q9BRQ3 303 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 CCDC28BQ9BUN5 200 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 ZNF717Q9BY31 904 aaPredicted RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 AICDAQ9GZX7 198 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 FAM60AQ9NP50 221 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 FGFR1OP2Q9NVK5 253 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SIDT1Q9NXL6 827 aaKnown RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 ASIC5Q9NY37 505 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TMEM9Q9P0T7 183 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 KLHL14Q9P2G3 628 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 SNX6Q9UNH7 406 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 USH1CQ9Y6N9 552 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 RALGAPA1Q6GYQ0 2036 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 ADAMTS9Q9P2N4 1935 aa5.22□□□□□ -1.57
ZEB1-220ENST00000560909 TP53BP1Q12888 1972 aaPredicted RBP5.22□□□□□ -1.57
ZEB1-220ENST00000560909 PCM1Q15154 2024 aa5.21□□□□□ -1.57
ZEB1-220ENST00000560909 CEP295Q9C0D2 2601 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 CACNA1AO00555 2505 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 LRIT2A6NDA9 550 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TRPC5OSA6NMA1 111 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TMEM233B4DJY2 109 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 B4E171 279 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 H0YGG7 62 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TMX2-CTNND1H3BSU7 103 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 SLC28A1O00337 649 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 TXNDC9O14530 226 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 GIPC1O14908 333 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 LSM1O15116 133 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 HCRTR1O43613 425 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 NRP2O60462 931 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 PRAMEF10O60809 474 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 VPS4BO75351 444 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 RFPL3O75679 317 aa5.21□□□□□ -1.58
ZEB1-220ENST00000560909 RSL1D1O76021 490 aaKnown RBP5.21□□□□□ -1.58
ZEB1-220ENST00000560909 KLHL18O94889 574 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms