RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 E7ENX8 843 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 NPIPA2E9PIF3 369 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 NPIPA3F8WFD2 350 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 NIPSNAP2O75323 286 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 PSIP1O75475 530 aaKnown RBP9.25□□□□□ -0.93
TPM1-225ENST00000560679 SLC16A8O95907 504 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 FGGP02679 453 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 RAF1P04049 648 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 RPS3P23396 243 aaKnown RBP eCLIP9.25□□□□□ -0.93
TPM1-225ENST00000560679 ACVR2AP27037 513 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 ATP5DP30049 168 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 ADSLP30566 484 aaPredicted RBP9.25□□□□□ -0.93
TPM1-225ENST00000560679 PRAMEP78395 509 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 TAP2Q03519 686 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 ACTN3Q08043 901 aaPredicted RBP9.25□□□□□ -0.93
TPM1-225ENST00000560679 CDH17Q12864 832 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 KCNJ11Q14654 390 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 ARHGAP19Q14CB8 494 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 TYSND1Q2T9J0 566 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 P3H1Q32P28 736 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 GXYLT1Q4G148 440 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 ANKRD20A4Q4UJ75 823 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 HSP90B2PQ58FF3 399 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 SEL1L2Q5TEA6 688 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 CAMKMTQ7Z624 323 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 LRRC56Q8IYG6 542 aaPredicted RBP9.25□□□□□ -0.93
TPM1-225ENST00000560679 KCT2Q8NC54 265 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 NFAM1Q8NET5 270 aaPredicted RBP9.25□□□□□ -0.93
TPM1-225ENST00000560679 OR5M9Q8NGP3 310 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 SPATA3Q8NHX4 192 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 MAGEC3Q8TD91 643 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.25□□□□□ -0.93
TPM1-225ENST00000560679 ALG3Q92685 438 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 SLCO2A1Q92959 643 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 FAM136AQ96C01 138 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 PEX11GQ96HA9 241 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 FOPNLQ96NB1 174 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 BIRC8Q96P09 236 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 PKP4Q99569 1192 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 DEFB127Q9H1M4 99 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 ZDHHC11Q9H8X9 412 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 MED4Q9NPJ6 270 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 GALPQ9UBC7 116 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 CBLCQ9ULV8 474 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 SH2B3Q9UQQ2 575 aa9.25□□□□□ -0.93
TPM1-225ENST00000560679 NBEAL1Q6ZS30 2694 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 KLRC4-KLRK1H3BQV0 150 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 H7BY64 318 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 SMAPO00193 183 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 POLR3GO15318 223 aaPredicted RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 CD3EAPO15446 510 aaKnown RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 DNAJB6O75190 326 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 LY6G6DO95868 133 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 ADRA1DP25100 572 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 PPARGP37231 505 aaPredicted RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 COILP38432 576 aaPredicted RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 KIR2DL3P43628 341 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 ZFP36L2P47974 494 aaKnown RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 TTPAP49638 278 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 EIF3BP55884 814 aaKnown RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 ABATP80404 500 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 MPP1Q00013 466 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 CUL1Q13616 776 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 ACSBG2Q5FVE4 666 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 B3GNT6Q6ZMB0 384 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 MAATS1Q7Z4T9 603 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 LINC00523Q86TU6 105 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 CYP4Z2PQ8N1L4 340 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 MREGQ8N565 214 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 OR10Q1Q8NGQ4 319 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 NUDT8Q8WV74 236 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 TM4SF19Q96DZ7 209 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 PRAP1Q96NZ9 151 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 OR1F2PQ96R84 312 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 ANKHQ9HCJ1 492 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 ABCF3Q9NUQ8 709 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 UTP6Q9NYH9 597 aaKnown RBP9.24□□□□□ -0.93
TPM1-225ENST00000560679 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
TPM1-225ENST00000560679 NAALAD2Q9Y3Q0 740 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 PCDHA3Q9Y5H8 950 aa9.24□□□□□ -0.93
TPM1-225ENST00000560679 KCNE1BA0A087WTH5 132 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 FAM187AA6NFU0 413 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 FAM166BA8MTA8 275 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 FCHO1O14526 889 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 KPNA5O15131 536 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 PSMD3O43242 534 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 FHP07954 510 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 ARNTP27540 789 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 RWDD2BP57060 319 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 RPS15AP62244 130 aaKnown RBP9.23□□□□□ -0.93
TPM1-225ENST00000560679 TERF2Q15554 542 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 KLHL38Q2WGJ6 581 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 SLC25A35Q3KQZ1 300 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 FLYWCH1Q4VC44 716 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 ZNF585AQ6P3V2 769 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 WDR53Q7Z5U6 358 aaPredicted RBP9.23□□□□□ -0.93
TPM1-225ENST00000560679 LRRC6Q86X45 466 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 AFAP1L2Q8N4X5 818 aa9.23□□□□□ -0.93
TPM1-225ENST00000560679 RELL2Q8NC24 303 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms