RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 E9PQ18 207 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 MMP20O60882 483 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 TNFRSF21O75509 655 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 DNAJB5O75953 348 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 FURINP09958 794 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 CISD3P0C7P0 127 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 C1GALT1C1LP0DN25 315 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 PCSK2P16519 638 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 C21orf33P30042 268 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-216ENST00000559819 TGFBR2P37173 567 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SLC19A1P41440 591 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 DGKGP49619 791 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 EPHA5P54756 1037 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SELENOWP63302 87 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 NFE2L1Q14494 772 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 DHCR24Q15392 516 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 CYP2A13Q16696 494 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SYT16Q17RD7 645 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 GCNT6Q5T4J0 391 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 NLRP8Q86W28 1048 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 CCDC103Q8IW40 242 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 SFTPA1Q8IWL2 248 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 GPR65Q8IYL9 337 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF784Q8NCA9 323 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-216ENST00000559819 OR10G2Q8NGC3 310 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 OR9Q2Q8NGE9 314 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.63□□□□□ -0.87
LRRC28-216ENST00000559819 COQ10AQ96MF6 247 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF347Q96SE7 839 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 ACAT2Q9BWD1 397 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 BHLHE41Q9C0J9 482 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-216ENST00000559819 AKIP1Q9NQ31 210 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 RAD18Q9NS91 495 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 PADI2Q9Y2J8 665 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 PCDHGB3Q9Y5G1 929 aa9.63□□□□□ -0.87
LRRC28-216ENST00000559819 OR2A25A4D2G3 310 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 CLDN25C9JDP6 229 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 CBFA2T3O75081 653 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 TIMP1P01033 207 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 CYP17A1P05093 508 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 IL3P08700 152 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 POU2F1P14859 743 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PPIBP23284 216 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SLC6A11P48066 632 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 DGKEP52429 567 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 TAP2Q03519 686 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PCDH1Q08174 1060 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PPIGQ13427 754 aaKnown RBP eCLIP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF846Q147U1 533 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 RGS21Q2M5E4 152 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 FAM83HQ6ZRV2 1179 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PRSS48Q7RTY5 328 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 ADCK1Q86TW2 530 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 LRRC56Q8IYG6 542 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 OR9A1PQ8NGU1 263 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SLC5A11Q8WWX8 675 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PPCDCQ96CD2 204 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SPATA9Q9BWV2 254 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 GABARAPL3Q9BY60 117 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 TBC1D14Q9P2M4 693 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 DKK3Q9UBP4 350 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 CORO2BQ9UQ03 480 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PRAMEF33A0A0G2JMD5 474 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PRRT4C9JH25 899 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SLC22A1O15245 554 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PRAMEF10O60809 474 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 BMP4P12644 408 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 CD36P16671 472 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 DDX6P26196 483 aaKnown RBP eCLIP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 CHI3L1P36222 383 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 GPR1P46091 355 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PRIM2P49643 509 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 ST13P50502 369 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 IFITM3Q01628 133 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 E2F2Q14209 437 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 GANABQ14697 944 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SLC5A12Q1EHB4 618 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PROX2Q3B8N5 592 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 IFI44LQ53G44 452 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PAGE2BQ5JRK9 111 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 VN1R5Q7Z5H4 357 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF547Q8IVP9 402 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 LGI4Q8N135 537 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 OR4C15Q8NGM1 316 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 DYNC2LI1Q8TCX1 351 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 RSPRY1Q96DX4 576 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 NUS1Q96E22 293 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 METTL2AQ96IZ6 378 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 ZFYVE19Q96K21 471 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 HRASLS5Q96KN8 279 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SIGLEC11Q96RL6 698 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 COPS4Q9BT78 406 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 SGPP1Q9BX95 441 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 PALMDQ9NP74 551 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 MARK1Q9P0L2 795 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 RHCGQ9UBD6 479 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms