RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 C16orf47Q6ZP98 133 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-207ENST00000559734 SDCCAG8Q86SQ7 713 aaPredicted RBP10.04□□□□□ -0.8
TRAF3-207ENST00000559734 PRUNE1Q86TP1 453 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 REXO1L1PQ8IX06 675 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 CCDC170Q8IYT3 715 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 OR2M7Q8NG81 312 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 SPATA3Q8NHX4 192 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 FAM222BQ8WU58 562 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 ASB15Q8WXK1 588 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 LPGAT1Q92604 370 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 ALG3Q92685 438 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 PEX13Q92968 403 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 LRRC46Q96FV0 321 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 BIRC8Q96P09 236 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 TTTY12Q9BZ98 90 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 LDAHQ9H6V9 325 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 LIN28AQ9H9Z2 209 aaKnown RBP10.04□□□□□ -0.8
TRAF3-207ENST00000559734 RAB6BQ9NRW1 208 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 HPF1Q9NWY4 346 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 PCDHA13Q9Y5I0 950 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 SCN3AQ9NY46 2000 aa10.04□□□□□ -0.8
TRAF3-207ENST00000559734 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 KCNE1BA0A087WTH5 132 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 ATP6AP2A0A1C7CYW4 349 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 H3BMM5 538 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 PSMD12O00232 456 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 SMAD7O15105 426 aaKnown RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 PFDN6O15212 129 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 LCMT2O60294 686 aaKnown RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 ATP6AP2O75787 350 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 MYO1DO94832 1006 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 APRTP07741 180 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 CDH1P12830 882 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 HRH2P25021 359 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 IMPA1P29218 277 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 HOXC12P31275 282 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 GRK3P35626 688 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 FDFT1P37268 417 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 MAGEA5P43359 124 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 MAN2A2P49641 1150 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 DCAF7P61962 342 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 SKP1P63208 163 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 PPP2R2BQ00005 443 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 MEF2AQ02078 507 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 HERC3Q15034 1050 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 POU4F3Q15319 338 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 TTLL9Q3SXZ7 439 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 PCID2Q5JVF3 399 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 RNF187Q5TA31 235 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 MRNIPQ6NTE8 343 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 CES3Q6UWW8 571 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 IL20RBQ6UXL0 311 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 QSOX2Q6ZRP7 698 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 TRILQ7L0X0 811 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 LRRC56Q8IYG6 542 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 ZNF740Q8NDX6 193 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 NFAM1Q8NET5 270 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 ATG4AQ8WYN0 398 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 PHF3Q92576 2039 aaKnown RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 TM4SF19Q96DZ7 209 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 SLC30A3Q99726 388 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 CCDC77Q9BR77 488 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 CNPPD1Q9BV87 410 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 SARGQ9BW04 601 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 RBSNQ9H1K0 784 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 ZDHHC11Q9H8X9 412 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 NECTIN3Q9NQS3 549 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 PNO1Q9NRX1 252 aaKnown RBP10.03□□□□□ -0.8
TRAF3-207ENST00000559734 B4GALT7Q9UBV7 327 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 SLC22A7Q9Y694 548 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 HEATR5BQ9P2D3 2071 aa10.03□□□□□ -0.8
TRAF3-207ENST00000559734 FAM47E-STBD1D6RA91 191 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 ZBTB14O43829 449 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 CEP104O60308 925 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 GALR3O60755 368 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-207ENST00000559734 WDR1O75083 606 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 OR2J2O76002 312 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 VAPBO95292 243 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 ESR1P03372 595 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 F7P08709 466 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-207ENST00000559734 CELA3AP09093 270 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 ZNF888P0CJ79 500 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-207ENST00000559734 ETS1P14921 441 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 ALOX12P18054 663 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 BMP5P22003 454 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 CYLC1P35663 651 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-207ENST00000559734 ASCL1P50553 236 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 ZNF75DP51815 510 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 SPA17Q15506 151 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 RIPPLY2Q5TAB7 128 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 RGS9BPQ6ZS82 235 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 GK5Q6ZS86 529 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 UBE2R2Q712K3 238 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-207ENST00000559734 C17orf64Q86WR6 236 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 KRTAP1-3Q8IUG1 177 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 FAM109AQ8N4B1 249 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 TMEM251Q8N6I4 163 aa10.02□□□□□ -0.81
TRAF3-207ENST00000559734 PRELID2Q8N945 189 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 206.4 ms